Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.29■■□□□ 1
DDX39AO00148 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.29■■□□□ 1
DDX39AO00148 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
DDX39AO00148 AK4P3-201ENST00000418260 669 ntBASIC21.29■■□□□ 1
DDX39AO00148 BX664615.1-201ENST00000443558 458 ntBASIC21.29■■□□□ 1
DDX39AO00148 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.29■■□□□ 1
DDX39AO00148 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.29■■□□□ 1
DDX39AO00148 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
DDX39AO00148 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.29■■□□□ 1
DDX39AO00148 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
DDX39AO00148 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.28■■□□□ 1
DDX39AO00148 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.28■■□□□ 1
DDX39AO00148 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
DDX39AO00148 KRT18P35-201ENST00000510488 1269 ntBASIC21.28■■□□□ 1
DDX39AO00148 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.28■■□□□ 1
DDX39AO00148 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 AL445228.2-201ENST00000605589 952 ntBASIC21.28■■□□□ 1
DDX39AO00148 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 AL023973.1-201ENST00000624619 620 ntBASIC21.28■■□□□ 1
DDX39AO00148 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.28■■□□□ 1
DDX39AO00148 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.28■■□□□ 1
DDX39AO00148 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.28■■□□□ 1
DDX39AO00148 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX39AO00148 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
DDX39AO00148 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX39AO00148 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
DDX39AO00148 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX39AO00148 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX39AO00148 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX39AO00148 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
DDX39AO00148 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX39AO00148 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX39AO00148 FEM1AP3-201ENST00000403722 1741 ntBASIC21.27■■□□□ 1
DDX39AO00148 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX39AO00148 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.27■■□□□ 1
DDX39AO00148 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX39AO00148 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX39AO00148 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
DDX39AO00148 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX39AO00148 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX39AO00148 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.27■■□□□ 1
DDX39AO00148 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.27■■□□□ 1
DDX39AO00148 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
DDX39AO00148 WWOX-216ENST00000569818 525 ntBASIC21.27■■□□□ 1
DDX39AO00148 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.27■■□□□ 1
DDX39AO00148 AC120498.9-201ENST00000339021 3867 ntBASIC21.27■■□□□ 1
DDX39AO00148 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.27■□□□□ 0.99
DDX39AO00148 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
DDX39AO00148 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
DDX39AO00148 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
DDX39AO00148 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.27■□□□□ 0.99
DDX39AO00148 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
DDX39AO00148 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
DDX39AO00148 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
DDX39AO00148 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.27■□□□□ 0.99
DDX39AO00148 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.27■□□□□ 0.99
DDX39AO00148 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
DDX39AO00148 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX39AO00148 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
DDX39AO00148 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.26■□□□□ 0.99
DDX39AO00148 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX39AO00148 AL023284.2-201ENST00000405850 579 ntBASIC21.26■□□□□ 0.99
DDX39AO00148 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.26■□□□□ 0.99
DDX39AO00148 AC009947.2-201ENST00000444014 672 ntBASIC21.26■□□□□ 0.99
DDX39AO00148 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX39AO00148 COX11P1-201ENST00000489116 835 ntBASIC21.26■□□□□ 0.99
DDX39AO00148 YBX1P2-201ENST00000489612 999 ntBASIC21.26■□□□□ 0.99
DDX39AO00148 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.26■□□□□ 0.99
DDX39AO00148 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.26■□□□□ 0.99
DDX39AO00148 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.26■□□□□ 0.99
DDX39AO00148 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.26■□□□□ 0.99
DDX39AO00148 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms