Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMX2-CTNND1H3BSU7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMX2-CTNND1H3BSU7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMX2-CTNND1H3BSU7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TMX2-CTNND1H3BSU7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TMX2-CTNND1H3BSU7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TMX2-CTNND1H3BSU7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.58■□□□□ 0.57
TMX2-CTNND1H3BSU7 AC005332.7-201ENST00000614046 2005 ntBASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 INGX-201ENST00000359239 846 ntBASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 TSPY5P-201ENST00000426936 936 ntBASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 AC117947.1-201ENST00000427448 529 ntBASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 AC092647.4-201ENST00000457211 535 ntBASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.58■□□□□ 0.56
TMX2-CTNND1H3BSU7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 AC092338.2-201ENST00000568827 1415 ntBASIC18.57■□□□□ 0.56
TMX2-CTNND1H3BSU7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 Z85996.1-201ENST00000494644 937 ntBASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 AL353719.1-201ENST00000566847 864 ntBASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 AC139887.4-201ENST00000607877 719 ntBASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 AL023803.3-201ENST00000615559 522 ntBASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.56■□□□□ 0.56
TMX2-CTNND1H3BSU7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMX2-CTNND1H3BSU7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TMX2-CTNND1H3BSU7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TMX2-CTNND1H3BSU7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TMX2-CTNND1H3BSU7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TMX2-CTNND1H3BSU7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms