Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.5■□□□□ 0.07
FAM90A9PA6NNJ1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.5■□□□□ 0.07
FAM90A9PA6NNJ1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.5■□□□□ 0.07
FAM90A9PA6NNJ1 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.5■□□□□ 0.07
FAM90A9PA6NNJ1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM90A9PA6NNJ1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM90A9PA6NNJ1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FAM90A9PA6NNJ1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FAM90A9PA6NNJ1 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.5■□□□□ 0.07
FAM90A9PA6NNJ1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FAM90A9PA6NNJ1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 NEFHP1-201ENST00000412845 2629 ntBASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 FEM1AP3-201ENST00000403722 1741 ntBASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
FAM90A9PA6NNJ1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 Z85996.1-201ENST00000494644 937 ntBASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 AC116562.2-201ENST00000507042 360 ntBASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 NUDT16P1-203ENST00000513809 620 ntBASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 MIR4497-201ENST00000583208 89 ntBASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FAM90A9PA6NNJ1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.47■□□□□ 0.07
FAM90A9PA6NNJ1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms