Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AC020763.4-201ENST00000623414 4170 ntBASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AL161938.1-201ENST00000569833 2180 ntBASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AC079598.2-202ENST00000546624 1451 ntBASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MIR1224-201ENST00000408193 85 ntBASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AL445675.2-201ENST00000620291 557 ntBASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AC097493.4-201ENST00000641197 219 ntBASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AC141586.3-201ENST00000562166 1838 ntBASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV4S1A1TA0A5B7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 FSCN1P1-201ENST00000568912 1481 ntBASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AC116562.2-201ENST00000507042 360 ntBASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 NAPSB-206ENST00000562112 1266 ntBASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TCRBV4S1A1TA0A5B7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.21■□□□□ 0.02
TCRBV4S1A1TA0A5B7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TCRBV4S1A1TA0A5B7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TCRBV4S1A1TA0A5B7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.21■□□□□ 0.02
TCRBV4S1A1TA0A5B7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms