Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV2A0A0B4J234 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV2A0A0B4J234 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV2A0A0B4J234 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV2A0A0B4J234 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAV2A0A0B4J234 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAV2A0A0B4J234 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV2A0A0B4J234 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRAV2A0A0B4J234 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 FEM1AP3-201ENST00000403722 1741 ntBASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 B3GAT3P1-201ENST00000471720 806 ntBASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 MIR4785-201ENST00000585005 73 ntBASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV2A0A0B4J234 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 AL355355.2-201ENST00000442321 338 ntBASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 FAM207BP-201ENST00000447172 505 ntBASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 AC091390.4-202ENST00000476426 537 ntBASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 AP000692.2-201ENST00000608391 879 ntBASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 LINC01465-201ENST00000408887 1940 ntBASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV2A0A0B4J234 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 HTR7P1-202ENST00000624664 4411 ntBASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV2A0A0B4J234 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms