Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNU6-220P-201ENST00000390919 107 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 MIR1261-201ENST00000408659 82 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 AC139712.2-201ENST00000424302 339 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 AC087499.2-201ENST00000432861 149 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 RPL26P26-201ENST00000480251 434 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-138P-201ENST00000515952 107 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 AC079600.2-201ENST00000550076 130 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 AC018448.1-201ENST00000552843 316 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 AC068205.3-201ENST00000636385 468 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.83□□□□□ -1.96
PCDHB1Q9Y5F3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 AL391987.6-201ENST00000305671 199 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 Y_RNA.54-201ENST00000362766 105 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-727P-201ENST00000363592 107 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 MIR300-201ENST00000401138 83 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 MIR887-201ENST00000401258 79 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 AL603910.2-201ENST00000407268 136 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 MIR548I3-201ENST00000408378 149 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 MIR548I1-201ENST00000408810 149 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 MTND5P15-201ENST00000434246 349 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 AL445687.1-201ENST00000439946 251 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 UBBP3-201ENST00000445497 241 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 SNORA48.11-201ENST00000517015 89 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 AK6P2-201ENST00000549020 471 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 RRN3P3-201ENST00000549207 578 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 AL355297.2-201ENST00000604792 129 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 AL357075.2-201ENST00000614906 189 ntBASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PCDHB1Q9Y5F3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 MIR26A1-201ENST00000362205 77 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 SNORD113-8-201ENST00000363497 74 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 Y_RNA.277-201ENST00000364754 102 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 Y_RNA.286-201ENST00000364813 102 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-546P-201ENST00000383991 107 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 Y_RNA.416-201ENST00000384014 113 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-20P-201ENST00000384106 107 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 MIR561-201ENST00000385216 97 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 RNU2-52P-201ENST00000410680 190 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 AC004866.1-201ENST00000411748 78 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 AC003685.2-201ENST00000422795 395 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 AC096920.1-201ENST00000423991 241 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 AC063976.3-201ENST00000426849 329 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 RPS29P6-201ENST00000438196 145 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 AC005002.2-201ENST00000438228 269 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-625P-201ENST00000459412 107 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-1338P-201ENST00000516328 91 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 SNORA9.3-201ENST00000516383 129 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-1098P-201ENST00000516772 96 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 AC022616.8-201ENST00000533569 253 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 AC091544.4-201ENST00000555268 342 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 MIR4643-201ENST00000577473 78 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 AC023043.3-201ENST00000593113 385 ntBASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.81□□□□□ -1.96
PCDHB1Q9Y5F3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 Y_RNA.20-201ENST00000362479 113 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 SNORD56.5-201ENST00000364281 72 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 RNU6-234P-201ENST00000365229 104 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 RNU4-30P-201ENST00000410245 143 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 RNA5SP344-201ENST00000411081 104 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 RNU2-64P-201ENST00000411315 191 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 SUMO1P3-201ENST00000439961 304 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 SNORD109B-201ENST00000458961 67 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 SNORD109A-201ENST00000459128 67 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 RNU7-14P-201ENST00000459331 62 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 AC130289.1-201ENST00000577321 73 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 MIR3605-201ENST00000583214 100 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 AC005176.2-201ENST00000596933 147 ntBASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHB1Q9Y5F3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHB1Q9Y5F3 AC092593.1-201ENST00000515413 1815 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms