Protein–RNA interactions for Protein: Q9BTD8

RBM42, RNA-binding protein 42, humanhuman

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42Q9BTD8 AC114811.1-201ENST00000507207 168 ntBASIC5.67□□□□□ -1.5
RBM42Q9BTD8 RNA5SP497-201ENST00000516081 97 ntBASIC5.67□□□□□ -1.5
RBM42Q9BTD8 RNU6-948P-201ENST00000516374 107 ntBASIC5.67□□□□□ -1.5
RBM42Q9BTD8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.67□□□□□ -1.5
RBM42Q9BTD8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.67□□□□□ -1.5
RBM42Q9BTD8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RBM42Q9BTD8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RBM42Q9BTD8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.67□□□□□ -1.5
RBM42Q9BTD8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RBM42Q9BTD8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.66□□□□□ -1.5
RBM42Q9BTD8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RBM42Q9BTD8 AP001273.1-201ENST00000624493 3152 ntBASIC5.66□□□□□ -1.5
RBM42Q9BTD8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RBM42Q9BTD8 RN7SKP202-201ENST00000410439 330 ntBASIC5.66□□□□□ -1.5
RBM42Q9BTD8 AL356095.1-201ENST00000417217 199 ntBASIC5.66□□□□□ -1.5
RBM42Q9BTD8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.66□□□□□ -1.5
RBM42Q9BTD8 SNRPGP5-201ENST00000456003 220 ntBASIC5.66□□□□□ -1.5
RBM42Q9BTD8 RN7SL542P-201ENST00000467147 294 ntBASIC5.66□□□□□ -1.5
RBM42Q9BTD8 RN7SL604P-201ENST00000492589 296 ntBASIC5.66□□□□□ -1.5
RBM42Q9BTD8 AC022695.1-201ENST00000522089 237 ntBASIC5.66□□□□□ -1.5
RBM42Q9BTD8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RBM42Q9BTD8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RBM42Q9BTD8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RBM42Q9BTD8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.65□□□□□ -1.5
RBM42Q9BTD8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.65□□□□□ -1.5
RBM42Q9BTD8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RBM42Q9BTD8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RBM42Q9BTD8 AC007496.3-201ENST00000624987 3443 ntBASIC5.65□□□□□ -1.5
RBM42Q9BTD8 SNORA32-201ENST00000384072 121 ntBASIC5.65□□□□□ -1.5
RBM42Q9BTD8 RNU6-1241P-201ENST00000384536 107 ntBASIC5.65□□□□□ -1.5
RBM42Q9BTD8 MIR181B2-201ENST00000385004 89 ntBASIC5.65□□□□□ -1.5
RBM42Q9BTD8 MIR154-201ENST00000385243 84 ntBASIC5.65□□□□□ -1.5
RBM42Q9BTD8 RNA5SP171-201ENST00000391071 115 ntBASIC5.65□□□□□ -1.5
RBM42Q9BTD8 Z74021.1-201ENST00000423610 407 ntBASIC5.65□□□□□ -1.5
RBM42Q9BTD8 RNU7-45P-201ENST00000459460 63 ntBASIC5.65□□□□□ -1.5
RBM42Q9BTD8 SNORA67.7-201ENST00000516664 135 ntBASIC5.65□□□□□ -1.5
RBM42Q9BTD8 RNU1-45P-201ENST00000517191 141 ntBASIC5.65□□□□□ -1.5
RBM42Q9BTD8 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.65□□□□□ -1.51
RBM42Q9BTD8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.51
RBM42Q9BTD8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RBM42Q9BTD8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.65□□□□□ -1.51
RBM42Q9BTD8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC5.65□□□□□ -1.51
RBM42Q9BTD8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RBM42Q9BTD8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.64□□□□□ -1.51
RBM42Q9BTD8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.64□□□□□ -1.51
RBM42Q9BTD8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RBM42Q9BTD8 Y_RNA.168-201ENST00000363740 102 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 RNA5SP151-201ENST00000365632 117 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 MIR522-201ENST00000385071 87 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 MIR548G-201ENST00000408442 89 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 FTH1P12-201ENST00000432137 551 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 AL162151.2-201ENST00000448875 158 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 snoU13.24-201ENST00000458998 104 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 RNA5SP519-201ENST00000516480 119 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.64□□□□□ -1.51
RBM42Q9BTD8 MIR3158-1-201ENST00000583596 81 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.64□□□□□ -1.51
RBM42Q9BTD8 RNU1-30P-201ENST00000606575 163 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 FAM27D1-201ENST00000612308 341 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 MIR6875-201ENST00000617506 72 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 NEAT1_2.1-201ENST00000620525 105 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 AC006065.5-201ENST00000623427 349 ntBASIC5.64□□□□□ -1.51
RBM42Q9BTD8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RBM42Q9BTD8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RBM42Q9BTD8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RBM42Q9BTD8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RBM42Q9BTD8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RBM42Q9BTD8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.63□□□□□ -1.51
RBM42Q9BTD8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RBM42Q9BTD8 SNORD115-2-201ENST00000362842 82 ntBASIC5.63□□□□□ -1.51
RBM42Q9BTD8 SNORD14E-201ENST00000364009 85 ntBASIC5.63□□□□□ -1.51
RBM42Q9BTD8 SNORD115-20-201ENST00000365099 82 ntBASIC5.63□□□□□ -1.51
RBM42Q9BTD8 RNU6-1235P-201ENST00000384559 107 ntBASIC5.63□□□□□ -1.51
RBM42Q9BTD8 RNU6-748P-201ENST00000384648 107 ntBASIC5.63□□□□□ -1.51
RBM42Q9BTD8 MIR554-201ENST00000384874 96 ntBASIC5.63□□□□□ -1.51
RBM42Q9BTD8 MIR670-201ENST00000390142 98 ntBASIC5.63□□□□□ -1.51
RBM42Q9BTD8 RNU6-205P-201ENST00000390858 107 ntBASIC5.63□□□□□ -1.51
RBM42Q9BTD8 AC244636.1-201ENST00000421152 228 ntBASIC5.63□□□□□ -1.51
RBM42Q9BTD8 AC244098.2-201ENST00000422068 99 ntBASIC5.63□□□□□ -1.51
RBM42Q9BTD8 RNU6-498P-201ENST00000459468 107 ntBASIC5.63□□□□□ -1.51
RBM42Q9BTD8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.63□□□□□ -1.51
RBM42Q9BTD8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RBM42Q9BTD8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RBM42Q9BTD8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.62□□□□□ -1.51
RBM42Q9BTD8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RBM42Q9BTD8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RBM42Q9BTD8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RBM42Q9BTD8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RBM42Q9BTD8 RNA5SP130-201ENST00000364431 114 ntBASIC5.62□□□□□ -1.51
RBM42Q9BTD8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC5.62□□□□□ -1.51
RBM42Q9BTD8 AC087499.4-201ENST00000448505 178 ntBASIC5.62□□□□□ -1.51
RBM42Q9BTD8 RNA5SP446-201ENST00000515955 82 ntBASIC5.62□□□□□ -1.51
RBM42Q9BTD8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RBM42Q9BTD8 MAPK10-372ENST00000641954 3413 ntBASIC5.62□□□□□ -1.51
RBM42Q9BTD8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
RBM42Q9BTD8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RBM42Q9BTD8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.61□□□□□ -1.51
RBM42Q9BTD8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RBM42Q9BTD8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms