Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.11□□□□□ -1.91
CDC6Q99741 Y_RNA.65-201ENST00000362846 100 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 Y_RNA.243-201ENST00000364481 109 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 SNORA71.1-201ENST00000364523 117 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 RNA5SP125-201ENST00000364843 120 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 RNU6-514P-201ENST00000384208 107 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 RN7SKP220-201ENST00000410611 288 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 RNU2-14P-201ENST00000411053 191 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 AC022018.1-201ENST00000430685 241 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 AL445687.1-201ENST00000439946 251 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 Z96811.1-201ENST00000445880 108 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 HMGN2P18-201ENST00000450680 270 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 AC016925.1-201ENST00000458303 298 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 RPS27P29-201ENST00000463110 252 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 AC107934.2-201ENST00000518653 310 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 NDUFB9P3-201ENST00000521269 501 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 DEFB117-201ENST00000602356 141 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 AC022149.2-201ENST00000621061 203 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 AL513302.2-201ENST00000562313 1842 ntBASIC3.11□□□□□ -1.91
CDC6Q99741 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDC6Q99741 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDC6Q99741 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.1□□□□□ -1.91
CDC6Q99741 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDC6Q99741 RNU4-80P-201ENST00000363200 141 ntBASIC3.1□□□□□ -1.91
CDC6Q99741 SNORD115-30-201ENST00000364117 82 ntBASIC3.1□□□□□ -1.91
CDC6Q99741 Y_RNA.329-201ENST00000365209 107 ntBASIC3.1□□□□□ -1.91
CDC6Q99741 RNU6-975P-201ENST00000384296 105 ntBASIC3.1□□□□□ -1.91
CDC6Q99741 Y_RNA.515-201ENST00000384535 112 ntBASIC3.1□□□□□ -1.91
CDC6Q99741 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CDC6Q99741 RNU7-57P-201ENST00000459540 60 ntBASIC3.1□□□□□ -1.91
CDC6Q99741 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.1□□□□□ -1.91
CDC6Q99741 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.1□□□□□ -1.91
CDC6Q99741 PRELID2P1-201ENST00000552837 301 ntBASIC3.1□□□□□ -1.91
CDC6Q99741 MIR3162-201ENST00000581818 82 ntBASIC3.1□□□□□ -1.91
CDC6Q99741 ELOCP29-201ENST00000588193 334 ntBASIC3.1□□□□□ -1.91
CDC6Q99741 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.1□□□□□ -1.91
CDC6Q99741 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDC6Q99741 AC009487.2-201ENST00000420969 6821 ntBASIC3.1□□□□□ -1.91
CDC6Q99741 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.1□□□□□ -1.91
CDC6Q99741 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.09□□□□□ -1.91
CDC6Q99741 UBE2WP1-201ENST00000362030 340 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 RNU6-743P-201ENST00000364151 106 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 Y_RNA.269-201ENST00000364685 89 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 RNU6-740P-201ENST00000364734 105 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 RNA5SP126-201ENST00000365092 109 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 AP002088.1-201ENST00000382740 395 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 SNORD15B-201ENST00000384714 146 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CDC6Q99741 RNA5SP293-201ENST00000410527 113 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 AC114982.1-201ENST00000469402 321 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 RN7SL442P-201ENST00000473804 320 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 AC018868.1-201ENST00000491307 315 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 SNORA27.4-201ENST00000516650 95 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 RNA5SP490-201ENST00000517141 136 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 MIR2682-201ENST00000580305 110 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 UBL5P2-201ENST00000583788 219 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 AC009779.6-201ENST00000603972 165 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 U6.115-201ENST00000636045 103 ntBASIC3.09□□□□□ -1.91
CDC6Q99741 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
CDC6Q99741 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.09□□□□□ -1.92
CDC6Q99741 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDC6Q99741 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDC6Q99741 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.08□□□□□ -1.92
CDC6Q99741 MIR449A-201ENST00000362113 91 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 RNA5SP383-201ENST00000362934 120 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 RNU6-324P-201ENST00000363957 106 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 RNY1-201ENST00000364228 113 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 Y_RNA.275-201ENST00000364726 110 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 RNU6-438P-201ENST00000365561 103 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDC6Q99741 MIR561-201ENST00000385216 97 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 AL357139.1-201ENST00000407792 426 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 AC016717.1-201ENST00000448918 286 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 RPS4XP2-201ENST00000458402 793 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.08□□□□□ -1.92
CDC6Q99741 RNU4-71P-201ENST00000516258 113 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 RNU6-191P-201ENST00000516295 94 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.08□□□□□ -1.92
CDC6Q99741 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.08□□□□□ -1.92
CDC6Q99741 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.07□□□□□ -1.92
CDC6Q99741 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CDC6Q99741 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDC6Q99741 Y_RNA.76-201ENST00000362931 109 ntBASIC3.07□□□□□ -1.92
CDC6Q99741 AL031003.1-201ENST00000404229 172 ntBASIC3.07□□□□□ -1.92
CDC6Q99741 AC092427.1-202ENST00000430569 476 ntBASIC3.07□□□□□ -1.92
CDC6Q99741 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.07□□□□□ -1.92
CDC6Q99741 AC074290.1-201ENST00000448883 135 ntBASIC3.07□□□□□ -1.92
CDC6Q99741 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.07□□□□□ -1.92
CDC6Q99741 RNA5SP356-201ENST00000515972 94 ntBASIC3.07□□□□□ -1.92
CDC6Q99741 AL512605.2-201ENST00000592972 256 ntBASIC3.07□□□□□ -1.92
CDC6Q99741 AL162424.1-201ENST00000602325 221 ntBASIC3.07□□□□□ -1.92
CDC6Q99741 AC005828.6-201ENST00000606610 232 ntBASIC3.07□□□□□ -1.92
CDC6Q99741 snoZ196.1-201ENST00000625269 89 ntBASIC3.07□□□□□ -1.92
CDC6Q99741 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
CDC6Q99741 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.06□□□□□ -1.92
CDC6Q99741 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.06□□□□□ -1.92
CDC6Q99741 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms