Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 SNORD74.4-201ENST00000364129 80 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 SNORA63D-201ENST00000364359 132 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 SNORA4.2-201ENST00000365313 147 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 MT-TI-201ENST00000387365 69 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 RNA5SP239-201ENST00000410218 129 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 HMGN2P20-201ENST00000437531 273 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 SNORD11-201ENST00000459124 84 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 snoU13.28-201ENST00000459235 104 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 snoU13.14-201ENST00000459372 104 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 RPS26P55-201ENST00000471178 356 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 AC011406.1-201ENST00000512440 370 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 RNA5SP497-201ENST00000516081 97 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 CYCSP30-201ENST00000546447 172 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 AC091152.3-201ENST00000604227 325 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 MIR8058-201ENST00000615737 89 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 AC002064.3-201ENST00000623448 346 ntBASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CNTNAP3BQ96NU0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 SNORA27.1-201ENST00000362604 124 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 RNU6-414P-201ENST00000363705 104 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 RNU6-1240P-201ENST00000365155 104 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 RNU6-1138P-201ENST00000365359 106 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 Y_RNA.344-201ENST00000365381 112 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 RNU6-1292P-201ENST00000383856 107 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 SNORA1-201ENST00000384107 130 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 MIR1185-2-201ENST00000408687 86 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 AL035423.1-201ENST00000420331 213 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 HMGN2P16-201ENST00000456802 261 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 RNU7-171P-201ENST00000459581 62 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 RNU6-237P-201ENST00000515985 71 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 SCARNA23-201ENST00000516060 130 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 RNU6-126P-201ENST00000516685 103 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 MIR3129-201ENST00000581095 76 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 AC012493.2-201ENST00000595083 291 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 HSPE1P7-201ENST00000604681 321 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 MIR8057-201ENST00000620957 69 ntBASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNTNAP3BQ96NU0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 AL133412.1-201ENST00000380194 2992 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 AL356292.1-201ENST00000283110 373 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 RNU4-15P-201ENST00000362613 141 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 Y_RNA.213-201ENST00000364178 111 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 RNA5SP175-201ENST00000364275 119 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 Y_RNA.486-201ENST00000384398 107 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 MIR147B-201ENST00000390185 80 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 Z74021.1-201ENST00000423610 407 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 RNU6-504P-201ENST00000516568 104 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 AC022254.1-201ENST00000567857 235 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 RPL23AP91-201ENST00000569211 455 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 MIR5588-201ENST00000581890 63 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 AL929325.1-201ENST00000603096 117 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 Pinc.1-201ENST00000616452 154 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 AC011266.1-201ENST00000624119 3569 ntBASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTNAP3BQ96NU0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 AL353689.1-201ENST00000438895 199 ntBASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 RNU7-149P-201ENST00000516739 59 ntBASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 SCARNA15-202ENST00000516881 127 ntBASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 IGLV3-26-201ENST00000520756 302 ntBASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 MIR4662B-201ENST00000579498 81 ntBASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 AC006386.2-201ENST00000624491 75 ntBASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 AC012005.1-201ENST00000624575 75 ntBASIC3.93□□□□□ -1.78
CNTNAP3BQ96NU0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms