Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC112771.1-201ENST00000463581 102 ntBASIC4.42□□□□□ -1.7
LRCH3Q96II8 AC068657.1-201ENST00000520807 306 ntBASIC4.42□□□□□ -1.7
LRCH3Q96II8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.42□□□□□ -1.7
LRCH3Q96II8 AC022523.2-201ENST00000561045 150 ntBASIC4.42□□□□□ -1.7
LRCH3Q96II8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.42□□□□□ -1.7
LRCH3Q96II8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.42□□□□□ -1.7
LRCH3Q96II8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LRCH3Q96II8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LRCH3Q96II8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRCH3Q96II8 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.41□□□□□ -1.7
LRCH3Q96II8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LRCH3Q96II8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LRCH3Q96II8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LRCH3Q96II8 RNU6-1099P-201ENST00000363533 107 ntBASIC4.41□□□□□ -1.7
LRCH3Q96II8 RNU6-944P-201ENST00000364023 107 ntBASIC4.41□□□□□ -1.7
LRCH3Q96II8 Y_RNA.437-201ENST00000384113 113 ntBASIC4.41□□□□□ -1.7
LRCH3Q96II8 RNU6-24P-201ENST00000384440 107 ntBASIC4.41□□□□□ -1.7
LRCH3Q96II8 MIR490-201ENST00000384865 128 ntBASIC4.41□□□□□ -1.7
LRCH3Q96II8 RNU2-49P-201ENST00000410666 184 ntBASIC4.41□□□□□ -1.7
LRCH3Q96II8 AC016909.1-201ENST00000415916 166 ntBASIC4.41□□□□□ -1.7
LRCH3Q96II8 RN7SL601P-201ENST00000471221 293 ntBASIC4.41□□□□□ -1.7
LRCH3Q96II8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.41□□□□□ -1.7
LRCH3Q96II8 MIR449C-201ENST00000516047 92 ntBASIC4.41□□□□□ -1.7
LRCH3Q96II8 MIR3163-201ENST00000581592 73 ntBASIC4.41□□□□□ -1.7
LRCH3Q96II8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.41□□□□□ -1.7
LRCH3Q96II8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRCH3Q96II8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRCH3Q96II8 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
LRCH3Q96II8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.4□□□□□ -1.7
LRCH3Q96II8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LRCH3Q96II8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LRCH3Q96II8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.4□□□□□ -1.7
LRCH3Q96II8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LRCH3Q96II8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRCH3Q96II8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LRCH3Q96II8 RPL32P34-201ENST00000486380 400 ntBASIC4.4□□□□□ -1.71
LRCH3Q96II8 PPBPP1-201ENST00000510807 373 ntBASIC4.4□□□□□ -1.71
LRCH3Q96II8 RN7SKP282-201ENST00000516824 299 ntBASIC4.4□□□□□ -1.71
LRCH3Q96II8 MIR8058-201ENST00000615737 89 ntBASIC4.4□□□□□ -1.71
LRCH3Q96II8 FAS-AS1.2-201ENST00000620386 170 ntBASIC4.4□□□□□ -1.71
LRCH3Q96II8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.4□□□□□ -1.71
LRCH3Q96II8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.4□□□□□ -1.71
LRCH3Q96II8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRCH3Q96II8 FAM35CP-201ENST00000554755 2470 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRCH3Q96II8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
LRCH3Q96II8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRCH3Q96II8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRCH3Q96II8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.39□□□□□ -1.71
LRCH3Q96II8 RNU6-50P-201ENST00000362356 103 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 SNORA33-201ENST00000363664 130 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 MIR518F-201ENST00000384973 87 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 U8.17-201ENST00000391292 132 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 AL451046.2-201ENST00000403074 277 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 RNU6-402P-201ENST00000410678 103 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 AL513477.1-202ENST00000417061 214 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 VDAC1P3-201ENST00000434069 851 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 RNU7-164P-201ENST00000459221 62 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 RPS29P19-201ENST00000479709 171 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 AC078918.1-201ENST00000498515 228 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 RNU7-123P-201ENST00000515911 60 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 AC100770.1-201ENST00000532310 322 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 MIR6868-201ENST00000611215 58 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 MAPK10-372ENST00000641954 3413 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 AL136964.1-201ENST00000622038 2990 ntBASIC4.39□□□□□ -1.71
LRCH3Q96II8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRCH3Q96II8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRCH3Q96II8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRCH3Q96II8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRCH3Q96II8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRCH3Q96II8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.39□□□□□ -1.71
LRCH3Q96II8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.38□□□□□ -1.71
LRCH3Q96II8 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRCH3Q96II8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.38□□□□□ -1.71
LRCH3Q96II8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRCH3Q96II8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
LRCH3Q96II8 RNA5SP126-201ENST00000365092 109 ntBASIC4.38□□□□□ -1.71
LRCH3Q96II8 SNRPGP13-201ENST00000442212 177 ntBASIC4.38□□□□□ -1.71
LRCH3Q96II8 RNU7-171P-201ENST00000459581 62 ntBASIC4.38□□□□□ -1.71
LRCH3Q96II8 RNU6-795P-201ENST00000516323 103 ntBASIC4.38□□□□□ -1.71
LRCH3Q96II8 RNA5SP468-201ENST00000516782 93 ntBASIC4.38□□□□□ -1.71
LRCH3Q96II8 RNU7-172P-201ENST00000517125 64 ntBASIC4.38□□□□□ -1.71
LRCH3Q96II8 EIF4BP1-201ENST00000554881 351 ntBASIC4.38□□□□□ -1.71
LRCH3Q96II8 MIR4438-201ENST00000585271 93 ntBASIC4.38□□□□□ -1.71
LRCH3Q96II8 AC012531.4-201ENST00000616509 177 ntBASIC4.38□□□□□ -1.71
LRCH3Q96II8 MIR7154-201ENST00000620673 73 ntBASIC4.38□□□□□ -1.71
LRCH3Q96II8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRCH3Q96II8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRCH3Q96II8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.38□□□□□ -1.71
LRCH3Q96II8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRCH3Q96II8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRCH3Q96II8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.37□□□□□ -1.71
LRCH3Q96II8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
LRCH3Q96II8 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LRCH3Q96II8 AC010889.1-201ENST00000566193 2666 ntBASIC4.37□□□□□ -1.71
LRCH3Q96II8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRCH3Q96II8 MIR607-201ENST00000385241 96 ntBASIC4.37□□□□□ -1.71
LRCH3Q96II8 AC004941.2-201ENST00000427009 228 ntBASIC4.37□□□□□ -1.71
LRCH3Q96II8 snoU13.28-201ENST00000459235 104 ntBASIC4.37□□□□□ -1.71
LRCH3Q96II8 AC023141.12-201ENST00000512399 199 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms