Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU1-109P-201ENST00000383960 147 ntBASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 MIR95-201ENST00000385072 81 ntBASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 ARL5AP4-201ENST00000430731 512 ntBASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 AC074290.1-201ENST00000448883 135 ntBASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 MIR449C-201ENST00000516047 92 ntBASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 AL355297.2-201ENST00000604792 129 ntBASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTHRC1Q96CG8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.14-201ENST00000362415 103 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 U3.8-201ENST00000363675 217 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 RNU6-290P-201ENST00000365212 101 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.331-201ENST00000365267 102 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 MIR586-201ENST00000385035 97 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 MIR561-201ENST00000385216 97 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 RNU6-220P-201ENST00000390919 107 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 SNORA53-201ENST00000391141 249 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 RNU4-30P-201ENST00000410245 143 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 RNU2-32P-201ENST00000411193 191 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 HMGN2P35-201ENST00000412164 270 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 UBBP3-201ENST00000445497 241 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 NDUFB4P10-201ENST00000452541 359 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 RN7SL297P-201ENST00000483161 293 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 SRIP1-201ENST00000489235 288 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 RNA5SP76-201ENST00000516277 87 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 RNU6-1338P-201ENST00000516328 91 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 AC109329.2-201ENST00000519658 482 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 DEFB108E-201ENST00000524692 240 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 MIR4298-201ENST00000584380 73 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 MIR4753-201ENST00000585119 83 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 AC006380.1-201ENST00000603598 186 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 MIR6733-201ENST00000635723 61 ntBASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CTHRC1Q96CG8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 MIR410-201ENST00000362222 80 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 RNU6-438P-201ENST00000365561 103 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.447-201ENST00000384184 113 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 SNORA67.2-201ENST00000384300 149 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 RNU2-38P-201ENST00000410856 79 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 AL445687.1-201ENST00000439946 251 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 AC005042.3-201ENST00000453230 174 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 AC114982.1-201ENST00000469402 321 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 SNORA48.11-201ENST00000517015 89 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 AC022616.8-201ENST00000533569 253 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 AC008749.1-201ENST00000597650 306 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 AC022441.3-201ENST00000605737 136 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 AP001282.2-201ENST00000616149 309 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 SDR42E1P4-201ENST00000620894 481 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 MIR6852-201ENST00000621699 66 ntBASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CTHRC1Q96CG8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 AC062016.1-201ENST00000355719 319 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.237-201ENST00000364439 102 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.478-201ENST00000384358 107 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.518-201ENST00000384552 113 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.541-201ENST00000384640 113 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 Y_RNA.569-201ENST00000384749 103 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 AL139095.1-201ENST00000404326 391 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 MIR548H3-201ENST00000408771 118 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 AC092427.1-202ENST00000430569 476 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 TOMM22P2-201ENST00000430735 237 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 MTND4LP30-201ENST00000454092 297 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 HSPE1P25-201ENST00000455484 251 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 RNU6-965P-201ENST00000516721 96 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 MIR4319-201ENST00000577285 85 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 MIR3162-201ENST00000581818 82 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 MIR4672-201ENST00000583126 81 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 AC091932.3-201ENST00000624223 323 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 AC008873.1-201ENST00000625051 138 ntBASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.49□□□□□ -2.01
CTHRC1Q96CG8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 RNU6-545P-201ENST00000362681 104 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 SNORA20.1-201ENST00000364790 130 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 RNU6-1180P-201ENST00000364935 107 ntBASIC2.48□□□□□ -2.01
CTHRC1Q96CG8 SNORD31B-201ENST00000364977 69 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 299.9 ms