Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC015712.3-201ENST00000559380 164 ntBASIC5.91□□□□□ -1.46
TRIM41Q8WV44 MIR378D2-201ENST00000580636 98 ntBASIC5.91□□□□□ -1.46
TRIM41Q8WV44 AC020914.4-201ENST00000597690 277 ntBASIC5.91□□□□□ -1.46
TRIM41Q8WV44 AL670379.3-201ENST00000605040 251 ntBASIC5.91□□□□□ -1.46
TRIM41Q8WV44 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM41Q8WV44 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM41Q8WV44 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM41Q8WV44 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM41Q8WV44 IL33-202ENST00000417746 2327 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM41Q8WV44 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM41Q8WV44 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM41Q8WV44 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM41Q8WV44 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM41Q8WV44 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM41Q8WV44 RNU4-43P-201ENST00000410628 137 ntBASIC5.9□□□□□ -1.46
TRIM41Q8WV44 AC063976.4-201ENST00000421971 163 ntBASIC5.9□□□□□ -1.46
TRIM41Q8WV44 AC245047.4-201ENST00000433189 144 ntBASIC5.9□□□□□ -1.46
TRIM41Q8WV44 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM41Q8WV44 RPS4XP2-201ENST00000458402 793 ntBASIC5.9□□□□□ -1.46
TRIM41Q8WV44 RN7SL594P-201ENST00000470590 287 ntBASIC5.9□□□□□ -1.46
TRIM41Q8WV44 VWA8P1-201ENST00000510889 176 ntBASIC5.9□□□□□ -1.46
TRIM41Q8WV44 AC093331.1-201ENST00000521474 169 ntBASIC5.9□□□□□ -1.46
TRIM41Q8WV44 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC5.9□□□□□ -1.47
TRIM41Q8WV44 AC008555.8-201ENST00000623602 2168 ntBASIC5.89□□□□□ -1.47
TRIM41Q8WV44 RNU4-15P-201ENST00000362613 141 ntBASIC5.89□□□□□ -1.47
TRIM41Q8WV44 U8.1-201ENST00000362843 134 ntBASIC5.89□□□□□ -1.47
TRIM41Q8WV44 U3.8-201ENST00000363675 217 ntBASIC5.89□□□□□ -1.47
TRIM41Q8WV44 RNU6-1080P-201ENST00000383982 107 ntBASIC5.89□□□□□ -1.47
TRIM41Q8WV44 RNY3P5-201ENST00000384127 102 ntBASIC5.89□□□□□ -1.47
TRIM41Q8WV44 RNU6-19P-201ENST00000384718 107 ntBASIC5.89□□□□□ -1.47
TRIM41Q8WV44 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC5.89□□□□□ -1.47
TRIM41Q8WV44 RPL36AP21-201ENST00000490372 323 ntBASIC5.89□□□□□ -1.47
TRIM41Q8WV44 RNA5SP468-201ENST00000516782 93 ntBASIC5.89□□□□□ -1.47
TRIM41Q8WV44 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.89□□□□□ -1.47
TRIM41Q8WV44 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.89□□□□□ -1.47
TRIM41Q8WV44 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM41Q8WV44 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRIM41Q8WV44 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM41Q8WV44 MIR548B-201ENST00000385247 97 ntBASIC5.88□□□□□ -1.47
TRIM41Q8WV44 MIR548A3-201ENST00000385297 97 ntBASIC5.88□□□□□ -1.47
TRIM41Q8WV44 HMGN2P20-201ENST00000437531 273 ntBASIC5.88□□□□□ -1.47
TRIM41Q8WV44 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM41Q8WV44 RNU7-115P-201ENST00000516433 55 ntBASIC5.88□□□□□ -1.47
TRIM41Q8WV44 IGKV2-26-201ENST00000518305 343 ntBASIC5.88□□□□□ -1.47
TRIM41Q8WV44 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM41Q8WV44 RPS15AP11-201ENST00000594193 385 ntBASIC5.88□□□□□ -1.47
TRIM41Q8WV44 AC046143.2-201ENST00000609789 160 ntBASIC5.88□□□□□ -1.47
TRIM41Q8WV44 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM41Q8WV44 USP33-201ENST00000357428 4155 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM41Q8WV44 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM41Q8WV44 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM41Q8WV44 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.87□□□□□ -1.47
TRIM41Q8WV44 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM41Q8WV44 RNU6-1305P-201ENST00000364353 104 ntBASIC5.87□□□□□ -1.47
TRIM41Q8WV44 RNU6-597P-201ENST00000365620 102 ntBASIC5.87□□□□□ -1.47
TRIM41Q8WV44 SNORD116-21-201ENST00000384507 92 ntBASIC5.87□□□□□ -1.47
TRIM41Q8WV44 RNU6-482P-201ENST00000391068 107 ntBASIC5.87□□□□□ -1.47
TRIM41Q8WV44 Y_RNA.587-201ENST00000391210 103 ntBASIC5.87□□□□□ -1.47
TRIM41Q8WV44 Y_RNA.630-201ENST00000411370 108 ntBASIC5.87□□□□□ -1.47
TRIM41Q8WV44 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM41Q8WV44 AL121890.5-201ENST00000620848 304 ntBASIC5.87□□□□□ -1.47
TRIM41Q8WV44 AL513302.2-201ENST00000562313 1842 ntBASIC5.87□□□□□ -1.47
TRIM41Q8WV44 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
TRIM41Q8WV44 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM41Q8WV44 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM41Q8WV44 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM41Q8WV44 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM41Q8WV44 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM41Q8WV44 Y_RNA.124-201ENST00000363339 93 ntBASIC5.86□□□□□ -1.47
TRIM41Q8WV44 AC006989.1-201ENST00000427212 131 ntBASIC5.86□□□□□ -1.47
TRIM41Q8WV44 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM41Q8WV44 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM41Q8WV44 AL158147.1-201ENST00000443970 75 ntBASIC5.86□□□□□ -1.47
TRIM41Q8WV44 SNRPGP8-201ENST00000454064 226 ntBASIC5.86□□□□□ -1.47
TRIM41Q8WV44 AC026333.2-201ENST00000542164 106 ntBASIC5.86□□□□□ -1.47
TRIM41Q8WV44 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM41Q8WV44 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM41Q8WV44 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM41Q8WV44 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
TRIM41Q8WV44 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM41Q8WV44 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM41Q8WV44 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM41Q8WV44 MAPK10-373ENST00000641983 6772 ntBASIC5.85□□□□□ -1.47
TRIM41Q8WV44 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TRIM41Q8WV44 MIR764-201ENST00000390811 85 ntBASIC5.85□□□□□ -1.47
TRIM41Q8WV44 AL441985.1-201ENST00000457727 251 ntBASIC5.85□□□□□ -1.47
TRIM41Q8WV44 snoU13.15-201ENST00000459407 104 ntBASIC5.85□□□□□ -1.47
TRIM41Q8WV44 AC006445.2-201ENST00000510061 472 ntBASIC5.85□□□□□ -1.47
TRIM41Q8WV44 MIR5582-201ENST00000579697 68 ntBASIC5.85□□□□□ -1.47
TRIM41Q8WV44 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM41Q8WV44 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM41Q8WV44 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM41Q8WV44 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM41Q8WV44 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
TRIM41Q8WV44 AC068647.1-201ENST00000489539 2265 ntBASIC5.85□□□□□ -1.47
TRIM41Q8WV44 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM41Q8WV44 IL33-203ENST00000456383 2501 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM41Q8WV44 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM41Q8WV44 Y_RNA.35-201ENST00000362601 101 ntBASIC5.84□□□□□ -1.47
TRIM41Q8WV44 RNA5SP99-201ENST00000364020 114 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms