Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.58□□□□□ -2
RFX6Q8HWS3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
RFX6Q8HWS3 RNA5SP361-201ENST00000362686 118 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 Y_RNA.180-201ENST00000363867 113 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 SNORA25.6-201ENST00000364121 118 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 Y_RNA.237-201ENST00000364439 102 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 SNORA67.1-201ENST00000364749 141 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 RNU6-245P-201ENST00000384020 107 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 RNU6-318P-201ENST00000384283 103 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 MIR196B-201ENST00000384852 84 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 MIR29B2-201ENST00000385055 81 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 AC063976.3-201ENST00000426849 329 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 RPL30P4-201ENST00000429309 333 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 SNORA25.14-201ENST00000516481 132 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 RNU6-1012P-201ENST00000516606 109 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 RN7SKP49-201ENST00000516675 260 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 SCARNA3-201ENST00000517097 143 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 AC023824.2-201ENST00000566185 400 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 MIR3199-1-201ENST00000582434 88 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.57□□□□□ -2
RFX6Q8HWS3 Y_RNA.772-201ENST00000606692 102 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 AC090517.3-201ENST00000625170 141 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.57□□□□□ -2
RFX6Q8HWS3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.57□□□□□ -2
RFX6Q8HWS3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RFX6Q8HWS3 MAPK10-266ENST00000641066 6555 ntBASIC2.57□□□□□ -2
RFX6Q8HWS3 MIR6073-201ENST00000352083 89 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 SNORA80A-201ENST00000363922 136 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 SNORA38-201ENST00000363946 132 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 RNA5SP456-201ENST00000364002 114 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 Y_RNA.439-201ENST00000384119 94 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 MIR218-1-201ENST00000384999 110 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 MIR27B-201ENST00000385129 97 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.56□□□□□ -2
RFX6Q8HWS3 U6atac.2-201ENST00000408644 118 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 MIR548H3-201ENST00000408771 118 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 RNA5SP181-201ENST00000410246 98 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 RNU6-1001P-201ENST00000411265 100 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 PIGPP3-201ENST00000425307 415 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 MTND5P15-201ENST00000434246 349 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 RPS23P5-201ENST00000495419 428 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.56□□□□□ -2
RFX6Q8HWS3 RNA5SP320-201ENST00000516263 124 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 SNORA81.3-201ENST00000517283 198 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 AC010999.1-201ENST00000611856 324 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 AC240442.1-201ENST00000616055 283 ntBASIC2.56□□□□□ -2
RFX6Q8HWS3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.56□□□□□ -2
RFX6Q8HWS3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RFX6Q8HWS3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
RFX6Q8HWS3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.56□□□□□ -2
RFX6Q8HWS3 AL391987.6-201ENST00000305671 199 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 SNORD27-201ENST00000363981 72 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 Y_RNA.274-201ENST00000364714 101 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 MIR329-1-201ENST00000385028 80 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 MIR549A-201ENST00000385268 96 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 MRPL35P1-201ENST00000404272 572 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 AL603910.2-201ENST00000407268 136 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 SNORD12B-201ENST00000410433 91 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 AL139156.1-201ENST00000412785 841 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 HMGB3P3-201ENST00000510526 400 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 RNA5SP356-201ENST00000515972 94 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 SNORA31.15-201ENST00000516771 132 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 RNU6-182P-201ENST00000516970 105 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 HSPE1P18-201ENST00000517602 280 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.55□□□□□ -2
RFX6Q8HWS3 MIR4659A-201ENST00000580269 81 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 MIR4300-201ENST00000581016 96 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.55□□□□□ -2
RFX6Q8HWS3 AC105245.1-201ENST00000581934 244 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 AC069294.1-201ENST00000608397 350 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.55□□□□□ -2
RFX6Q8HWS3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RFX6Q8HWS3 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
RFX6Q8HWS3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
RFX6Q8HWS3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
RFX6Q8HWS3 AC080128.1-201ENST00000474389 1917 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 AC062016.1-201ENST00000355719 319 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 Y_RNA.16-201ENST00000362421 102 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 SNORD81.1-201ENST00000363064 77 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 Y_RNA.179-201ENST00000363844 90 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 Y_RNA.352-201ENST00000365439 102 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 RNU6-926P-201ENST00000384075 107 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 RNU1-138P-201ENST00000384093 164 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 PCNPP3-201ENST00000393579 471 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 MIR548M-201ENST00000408260 86 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.54□□□□□ -2
RFX6Q8HWS3 AL139109.1-201ENST00000455491 297 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 RNU6-1338P-201ENST00000516328 91 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 MIR4643-201ENST00000577473 78 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 AC004792.1-201ENST00000614523 137 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 AC005562.2-201ENST00000618264 111 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 U2.22-201ENST00000636441 106 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RFX6Q8HWS3 LINC02555-201ENST00000563933 1951 ntBASIC2.54□□□□□ -2
RFX6Q8HWS3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RFX6Q8HWS3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
RFX6Q8HWS3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms