Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
RNF180Q86T96 Y_RNA.214-201ENST00000364201 112 ntBASIC3□□□□□ -1.93
RNF180Q86T96 SNORA51.4-201ENST00000364993 124 ntBASIC3□□□□□ -1.93
RNF180Q86T96 Y_RNA.462-201ENST00000384268 102 ntBASIC3□□□□□ -1.93
RNF180Q86T96 MIR504-201ENST00000385065 83 ntBASIC3□□□□□ -1.93
RNF180Q86T96 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3□□□□□ -1.93
RNF180Q86T96 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3□□□□□ -1.93
RNF180Q86T96 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3□□□□□ -1.93
RNF180Q86T96 TOMM22P2-201ENST00000430735 237 ntBASIC3□□□□□ -1.93
RNF180Q86T96 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3□□□□□ -1.93
RNF180Q86T96 UQCRHP3-201ENST00000451503 251 ntBASIC3□□□□□ -1.93
RNF180Q86T96 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3□□□□□ -1.93
RNF180Q86T96 Y_RNA.638-201ENST00000459374 113 ntBASIC3□□□□□ -1.93
RNF180Q86T96 RN7SKP43-201ENST00000516173 320 ntBASIC3□□□□□ -1.93
RNF180Q86T96 MIR4503-201ENST00000582187 83 ntBASIC3□□□□□ -1.93
RNF180Q86T96 AC005176.2-201ENST00000596933 147 ntBASIC3□□□□□ -1.93
RNF180Q86T96 AC090115.4-201ENST00000609970 188 ntBASIC3□□□□□ -1.93
RNF180Q86T96 TTK-211ENST00000627129 240 ntTSL 5 BASIC3□□□□□ -1.93
RNF180Q86T96 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3□□□□□ -1.93
RNF180Q86T96 U6.104-201ENST00000637979 90 ntBASIC3□□□□□ -1.93
RNF180Q86T96 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RNF180Q86T96 AC009487.4-201ENST00000624969 3585 ntBASIC3□□□□□ -1.93
RNF180Q86T96 LINC02555-201ENST00000563933 1951 ntBASIC3□□□□□ -1.93
RNF180Q86T96 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
RNF180Q86T96 RNU6-770P-201ENST00000363929 105 ntBASIC2.99□□□□□ -1.93
RNF180Q86T96 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RNF180Q86T96 RAB28P5-201ENST00000427490 651 ntBASIC2.99□□□□□ -1.93
RNF180Q86T96 HMGN2P18-201ENST00000450680 270 ntBASIC2.99□□□□□ -1.93
RNF180Q86T96 AL137159.1-201ENST00000452808 512 ntBASIC2.99□□□□□ -1.93
RNF180Q86T96 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF180Q86T96 ATP5EP1-201ENST00000510257 156 ntBASIC2.99□□□□□ -1.93
RNF180Q86T96 AL357075.2-201ENST00000614906 189 ntBASIC2.99□□□□□ -1.93
RNF180Q86T96 MIR376A1-201ENST00000616574 68 ntBASIC2.99□□□□□ -1.93
RNF180Q86T96 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.99□□□□□ -1.93
RNF180Q86T96 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RNF180Q86T96 ZNF658B-202ENST00000615961 3375 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.98□□□□□ -1.93
RNF180Q86T96 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF180Q86T96 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF180Q86T96 RNU6-545P-201ENST00000362681 104 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 RNU6-238P-201ENST00000363313 106 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 Y_RNA.143-201ENST00000363520 106 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 SNORD87-201ENST00000364849 89 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 SNORA26.7-201ENST00000391288 122 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 RNU6-130P-201ENST00000411112 103 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 ELOCP20-201ENST00000422460 345 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 AC245102.2-201ENST00000448956 180 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 AC016925.1-201ENST00000458303 298 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 HMGN2P9-201ENST00000476875 229 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 RPL26P26-201ENST00000480251 434 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.98□□□□□ -1.93
RNF180Q86T96 NDUFA5P6-201ENST00000542110 379 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 AC026271.5-201ENST00000577873 130 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 MIR3674-201ENST00000636576 68 ntBASIC2.98□□□□□ -1.93
RNF180Q86T96 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF180Q86T96 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF180Q86T96 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF180Q86T96 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF180Q86T96 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RNF180Q86T96 Y_RNA.19-201ENST00000362462 99 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 RNU6-626P-201ENST00000363354 107 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 Y_RNA.452-201ENST00000384202 108 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 MIR592-201ENST00000384959 97 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 SNORA3.2-201ENST00000408221 125 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 RNA5SP344-201ENST00000411081 104 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 RN7SKP192-201ENST00000411291 327 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 SRIP3-201ENST00000413200 219 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 AC005002.2-201ENST00000438228 269 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 IPO7P1-201ENST00000442031 636 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 RNA5SP282-201ENST00000516355 108 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 RNU2-34P-201ENST00000516534 121 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 AK6P2-201ENST00000549020 471 ntBASIC2.97□□□□□ -1.93
RNF180Q86T96 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.97□□□□□ -1.93
RNF180Q86T96 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF180Q86T96 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.96□□□□□ -1.94
RNF180Q86T96 U8.9-201ENST00000365667 134 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 RNU6-20P-201ENST00000384106 107 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 SNORD63-201ENST00000384262 68 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 RNU6-574P-201ENST00000384265 107 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 SNORA67.2-201ENST00000384300 149 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 RNU6-21P-201ENST00000384710 107 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 ELOCP21-201ENST00000412558 336 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.96□□□□□ -1.94
RNF180Q86T96 AC009963.1-201ENST00000417265 157 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 AC244505.4-201ENST00000434905 287 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 DYNLT3P2-201ENST00000442517 295 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 SSXP5-201ENST00000443473 287 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 AC003982.1-202ENST00000469928 248 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 RNU6-991P-201ENST00000516168 107 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 RNU6-948P-201ENST00000516374 107 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 AC245166.1-201ENST00000521012 253 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF180Q86T96 AL161670.1-201ENST00000554348 137 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.96□□□□□ -1.94
RNF180Q86T96 MYL12BP1-201ENST00000569826 507 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 MIR3149-201ENST00000584629 83 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 U4.1-201ENST00000620349 87 ntBASIC2.96□□□□□ -1.94
RNF180Q86T96 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms