Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 SNORA16B-201ENST00000364674 135 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 SNORA6-201ENST00000384033 151 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 RNU6-611P-201ENST00000384276 104 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 RNU6-318P-201ENST00000384283 103 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.471-201ENST00000384312 102 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 MIR561-201ENST00000385216 97 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 CBX3P9-201ENST00000402326 552 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 RNA5SP201-201ENST00000410316 124 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 SDAD1P3-201ENST00000427380 333 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 WARS2P1-201ENST00000429678 537 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 RPEP5-201ENST00000441137 268 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 AC067942.3-201ENST00000512025 362 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 RNU6-1012P-201ENST00000516606 109 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 SNORA48.11-201ENST00000517015 89 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 RNU6-586P-201ENST00000517265 104 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 UBL5P4-201ENST00000562584 236 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 MIR3923-201ENST00000579521 83 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 SNORD53-201ENST00000579969 78 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 MIR3149-201ENST00000584629 83 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 AC125232.2-201ENST00000592457 143 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 U4.1-201ENST00000620349 87 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 U6.92-201ENST00000636464 89 ntBASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SNAI3Q3KNW1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 MIRLET7G-201ENST00000362280 84 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 RNU4-15P-201ENST00000362613 141 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 RNU6-655P-201ENST00000362858 107 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 RNU6-1210P-201ENST00000363775 107 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.183-201ENST00000363882 113 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 RNU6-770P-201ENST00000363929 105 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.193-201ENST00000363979 102 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 RNU4-56P-201ENST00000364700 142 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 SNORA25B-201ENST00000365507 128 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.512-201ENST00000384518 102 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 RNU6-541P-201ENST00000384709 110 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 MIR221-201ENST00000385135 110 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 MIR1302-3-201ENST00000408128 138 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 AL731563.1-201ENST00000442202 214 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 AC079804.2-201ENST00000490376 200 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 RNA5SP54-201ENST00000516951 92 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 SNORA31.25-201ENST00000517242 134 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 AL161670.1-201ENST00000554348 137 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 AC004817.2-201ENST00000561794 651 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 PCGEM1.1-201ENST00000613431 131 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 AC005296.1-201ENST00000616145 209 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 ZNF720P1-201ENST00000562403 1939 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 BX322639.1-202ENST00000423987 2213 ntBASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SNAI3Q3KNW1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.26-201ENST00000362539 101 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.222-201ENST00000364264 102 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 RNU6-879P-201ENST00000364328 108 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 RNU4-52P-201ENST00000384209 138 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 RNU6-378P-201ENST00000384324 107 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 MIR329-1-201ENST00000385028 80 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 RNU6-1093P-201ENST00000391194 107 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 RNU6-397P-201ENST00000516226 104 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 RN7SKP49-201ENST00000516675 260 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 MIR5695-201ENST00000579717 85 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 AL031274.2-201ENST00000599419 203 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 AC240442.1-201ENST00000616055 283 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 AC009831.4-201ENST00000620744 325 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 MIR8062-201ENST00000621515 85 ntBASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.19-201ENST00000362462 99 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 RNA5SP361-201ENST00000362686 118 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.64-201ENST00000362845 102 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 RNU6-806P-201ENST00000365147 105 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 RNU6-1145P-201ENST00000384246 107 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 RNU6-301P-201ENST00000384277 107 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 Y_RNA.556-201ENST00000384677 113 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 SNORD78.2-201ENST00000391076 69 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 MIR208B-201ENST00000401172 77 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 AL355497.1-201ENST00000406262 551 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 RNU6-1001P-201ENST00000411265 100 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 HMGN2P38-201ENST00000423806 265 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 AC018868.1-201ENST00000491307 315 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 RNU6-1143P-201ENST00000516125 104 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 RNY3P15-201ENST00000516297 97 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 AC233702.2-202ENST00000562547 291 ntBASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.91□□□□□ -2.1
SNAI3Q3KNW1 MIR4659A-201ENST00000580269 81 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms