Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 SNORA11-201ENST00000408789 128 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 EIF4EP4-201ENST00000424916 578 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 AL121890.1-201ENST00000435457 205 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 RPS27P1-201ENST00000450552 247 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 AL031183.1-201ENST00000457667 207 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 RPL21P10-201ENST00000463521 490 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.89□□□□□ -1.79
RTN1Q16799 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.89□□□□□ -1.79
RTN1Q16799 RNU6-1337P-201ENST00000516525 95 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 RMST_8.1-201ENST00000610287 165 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.89□□□□□ -1.79
RTN1Q16799 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
RTN1Q16799 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.89□□□□□ -1.79
RTN1Q16799 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.89□□□□□ -1.79
RTN1Q16799 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RTN1Q16799 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RTN1Q16799 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTN1Q16799 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.88□□□□□ -1.79
RTN1Q16799 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
RTN1Q16799 RNU6-1255P-201ENST00000363434 112 ntBASIC3.88□□□□□ -1.79
RTN1Q16799 AL355796.1-201ENST00000406706 323 ntBASIC3.88□□□□□ -1.79
RTN1Q16799 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RTN1Q16799 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.88□□□□□ -1.79
RTN1Q16799 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.88□□□□□ -1.79
RTN1Q16799 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.88□□□□□ -1.79
RTN1Q16799 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.88□□□□□ -1.79
RTN1Q16799 RNU7-57P-201ENST00000459540 60 ntBASIC3.88□□□□□ -1.79
RTN1Q16799 AC092991.1-201ENST00000477176 376 ntBASIC3.88□□□□□ -1.79
RTN1Q16799 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.88□□□□□ -1.79
RTN1Q16799 MIR4753-201ENST00000585119 83 ntBASIC3.88□□□□□ -1.79
RTN1Q16799 MIR6075-201ENST00000620782 95 ntBASIC3.88□□□□□ -1.79
RTN1Q16799 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RTN1Q16799 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTN1Q16799 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTN1Q16799 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTN1Q16799 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTN1Q16799 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
RTN1Q16799 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTN1Q16799 TNPO1P3-201ENST00000436471 2662 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 RNU1-70P-201ENST00000362618 164 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 RNU6-1180P-201ENST00000364935 107 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 Y_RNA.393-201ENST00000383936 102 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 SNORA20B-201ENST00000384220 132 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 MIR1283-1-201ENST00000408494 87 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 AL358232.1-201ENST00000448030 501 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 HSPE1P13-201ENST00000451143 297 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 RNU7-14P-201ENST00000459331 62 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 MIR449C-201ENST00000516047 92 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.87□□□□□ -1.79
RTN1Q16799 AC019176.2-201ENST00000611579 315 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 MIR6129-201ENST00000616087 109 ntBASIC3.87□□□□□ -1.79
RTN1Q16799 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
RTN1Q16799 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RTN1Q16799 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.86□□□□□ -1.79
RTN1Q16799 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.86□□□□□ -1.79
RTN1Q16799 Y_RNA.43-201ENST00000362670 111 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 RNU1-105P-201ENST00000363470 161 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 RNY1P11-201ENST00000363759 113 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 RNU6-271P-201ENST00000363858 105 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 SNORD116-13-201ENST00000384408 92 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 MIR23B-201ENST00000384832 97 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 RNA5SP171-201ENST00000391071 115 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 MIR300-201ENST00000401138 83 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 AP000567.1-201ENST00000406413 156 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 Z98941.1-201ENST00000407764 100 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 CYCSP49-201ENST00000420810 319 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 EEF1B2P7-201ENST00000451177 676 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 RNU7-107P-201ENST00000459121 61 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 AC010401.1-201ENST00000463867 348 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 SNORA31.1-201ENST00000515993 133 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 SNORA31.5-201ENST00000516190 133 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 RNU2-56P-201ENST00000516826 190 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.86□□□□□ -1.79
RTN1Q16799 AP001328.1-201ENST00000528550 176 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 MIR4765-201ENST00000585007 77 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 MIR7975-201ENST00000619350 68 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 AC012314.7-201ENST00000619693 93 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 AL159152.1-201ENST00000635019 2587 ntBASIC3.86□□□□□ -1.79
RTN1Q16799 Z83843.1-201ENST00000604070 3685 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RTN1Q16799 RNY3P5-201ENST00000384127 102 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 SNORD14D-201ENST00000384390 87 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 MIR7-3-201ENST00000384898 110 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 RNU6-588P-201ENST00000410281 105 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 Y_RNA.622-201ENST00000411091 108 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.85□□□□□ -1.79
RTN1Q16799 AC017083.1-201ENST00000428093 483 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 AC006445.1-201ENST00000491925 405 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 RNA5SP170-201ENST00000517150 101 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 AC103810.1-201ENST00000579873 453 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.85□□□□□ -1.79
RTN1Q16799 POLR3GP1-201ENST00000594073 261 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 AP003357.1-201ENST00000604497 148 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 uc_338.1-201ENST00000612113 180 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 AC012640.5-201ENST00000623897 319 ntBASIC3.85□□□□□ -1.79
RTN1Q16799 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
RTN1Q16799 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.84□□□□□ -1.79
RTN1Q16799 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms