Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LAPTM4AQ15012 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LAPTM4AQ15012 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.02□□□□□ -1.77
LAPTM4AQ15012 AL139811.1-201ENST00000424779 2299 ntBASIC4.02□□□□□ -1.77
LAPTM4AQ15012 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.02□□□□□ -1.77
LAPTM4AQ15012 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LAPTM4AQ15012 RNA5SP515-201ENST00000364570 118 ntBASIC4.02□□□□□ -1.77
LAPTM4AQ15012 RNA5SP513-201ENST00000364648 118 ntBASIC4.02□□□□□ -1.77
LAPTM4AQ15012 MIR34C-201ENST00000384831 77 ntBASIC4.02□□□□□ -1.77
LAPTM4AQ15012 MIR153-1-201ENST00000384914 90 ntBASIC4.02□□□□□ -1.77
LAPTM4AQ15012 RNA5SP104-201ENST00000410989 118 ntBASIC4.02□□□□□ -1.77
LAPTM4AQ15012 AL022718.1-201ENST00000412004 84 ntBASIC4.02□□□□□ -1.77
LAPTM4AQ15012 AC093423.1-201ENST00000440817 142 ntBASIC4.02□□□□□ -1.77
LAPTM4AQ15012 HMGN2P10-201ENST00000448085 265 ntBASIC4.02□□□□□ -1.77
LAPTM4AQ15012 PPIAP21-201ENST00000464473 501 ntBASIC4.02□□□□□ -1.77
LAPTM4AQ15012 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
LAPTM4AQ15012 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.02□□□□□ -1.77
LAPTM4AQ15012 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.02□□□□□ -1.77
LAPTM4AQ15012 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
LAPTM4AQ15012 MIR6891-201ENST00000618788 93 ntBASIC4.02□□□□□ -1.77
LAPTM4AQ15012 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
LAPTM4AQ15012 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LAPTM4AQ15012 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.02□□□□□ -1.77
LAPTM4AQ15012 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.01□□□□□ -1.77
LAPTM4AQ15012 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
LAPTM4AQ15012 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.01□□□□□ -1.77
LAPTM4AQ15012 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LAPTM4AQ15012 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.01□□□□□ -1.77
LAPTM4AQ15012 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LAPTM4AQ15012 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.01□□□□□ -1.77
LAPTM4AQ15012 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
LAPTM4AQ15012 RNU6-624P-201ENST00000363411 107 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 Y_RNA.140-201ENST00000363474 103 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 SNORD115-28-201ENST00000363931 81 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 MIR1283-1-201ENST00000408494 87 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 RNA5SP306-201ENST00000411087 107 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 Z92545.1-201ENST00000411782 234 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 SPINT5P-201ENST00000448174 155 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 IGLV2-34-201ENST00000490007 283 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 PARP4P3-201ENST00000510265 317 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 SNORA31.4-201ENST00000516049 129 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 RNU5F-4P-201ENST00000516581 114 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 AC021739.1-201ENST00000559631 174 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 ZNF271P-202ENST00000465539 1970 ntBASIC4.01□□□□□ -1.77
LAPTM4AQ15012 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LAPTM4AQ15012 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
LAPTM4AQ15012 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.01□□□□□ -1.77
LAPTM4AQ15012 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LAPTM4AQ15012 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LAPTM4AQ15012 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4□□□□□ -1.77
LAPTM4AQ15012 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
LAPTM4AQ15012 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4□□□□□ -1.77
LAPTM4AQ15012 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4□□□□□ -1.77
LAPTM4AQ15012 RNU6-1244P-201ENST00000363614 108 ntBASIC4□□□□□ -1.77
LAPTM4AQ15012 Y_RNA.171-201ENST00000363760 102 ntBASIC4□□□□□ -1.77
LAPTM4AQ15012 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4□□□□□ -1.77
LAPTM4AQ15012 MIR550A3-201ENST00000390735 95 ntBASIC4□□□□□ -1.77
LAPTM4AQ15012 RNU6-1190P-201ENST00000410811 104 ntBASIC4□□□□□ -1.77
LAPTM4AQ15012 RNU1-98P-201ENST00000458992 160 ntBASIC4□□□□□ -1.77
LAPTM4AQ15012 MIR4480-201ENST00000582492 71 ntBASIC4□□□□□ -1.77
LAPTM4AQ15012 FAM25E-202ENST00000608562 189 ntBASIC4□□□□□ -1.77
LAPTM4AQ15012 AC069200.1-201ENST00000609511 323 ntBASIC4□□□□□ -1.77
LAPTM4AQ15012 AC091953.3-201ENST00000623220 236 ntBASIC4□□□□□ -1.77
LAPTM4AQ15012 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4□□□□□ -1.77
LAPTM4AQ15012 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
LAPTM4AQ15012 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
LAPTM4AQ15012 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
LAPTM4AQ15012 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
LAPTM4AQ15012 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.99□□□□□ -1.77
LAPTM4AQ15012 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LAPTM4AQ15012 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
LAPTM4AQ15012 RNA5SP87-201ENST00000384155 118 ntBASIC3.99□□□□□ -1.77
LAPTM4AQ15012 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
LAPTM4AQ15012 RNA5SP397-201ENST00000391323 118 ntBASIC3.99□□□□□ -1.77
LAPTM4AQ15012 AC010285.1-201ENST00000470580 392 ntBASIC3.99□□□□□ -1.77
LAPTM4AQ15012 AC083982.1-201ENST00000485679 344 ntBASIC3.99□□□□□ -1.77
LAPTM4AQ15012 MIR449C-201ENST00000516047 92 ntBASIC3.99□□□□□ -1.77
LAPTM4AQ15012 MIR4778-201ENST00000577635 80 ntBASIC3.99□□□□□ -1.77
LAPTM4AQ15012 AC078899.2-201ENST00000595282 212 ntBASIC3.99□□□□□ -1.77
LAPTM4AQ15012 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.99□□□□□ -1.77
LAPTM4AQ15012 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.99□□□□□ -1.77
LAPTM4AQ15012 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LAPTM4AQ15012 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LAPTM4AQ15012 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LAPTM4AQ15012 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LAPTM4AQ15012 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
LAPTM4AQ15012 RNU6-161P-201ENST00000363051 106 ntBASIC3.98□□□□□ -1.77
LAPTM4AQ15012 RNU6-686P-201ENST00000364839 107 ntBASIC3.98□□□□□ -1.77
LAPTM4AQ15012 SNORA70F-201ENST00000384142 135 ntBASIC3.98□□□□□ -1.77
LAPTM4AQ15012 Y_RNA.547-201ENST00000384654 119 ntBASIC3.98□□□□□ -1.77
LAPTM4AQ15012 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.98□□□□□ -1.77
LAPTM4AQ15012 AC016909.1-201ENST00000415916 166 ntBASIC3.98□□□□□ -1.77
LAPTM4AQ15012 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.98□□□□□ -1.77
LAPTM4AQ15012 AC233266.1-201ENST00000454518 96 ntBASIC3.98□□□□□ -1.77
LAPTM4AQ15012 RPS3P1-201ENST00000456781 192 ntBASIC3.98□□□□□ -1.77
LAPTM4AQ15012 RN7SL826P-201ENST00000479724 288 ntBASIC3.98□□□□□ -1.77
LAPTM4AQ15012 AC023141.12-201ENST00000512399 199 ntBASIC3.98□□□□□ -1.77
LAPTM4AQ15012 RNU6-1258P-201ENST00000516911 111 ntBASIC3.98□□□□□ -1.77
LAPTM4AQ15012 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.98□□□□□ -1.77
LAPTM4AQ15012 AL513043.2-201ENST00000573941 143 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms