Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC040926.1-201ENST00000530195 238 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC133794.1-201ENST00000602731 914 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC078795.2-201ENST00000602835 1252 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.24□□□□□ -2.45
HSPG2P98160 CDR1-202ENST00000625883 1485 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
HSPG2P98160 RNU6-161P-201ENST00000363051 106 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 RNA5SP117-201ENST00000365294 118 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 MTCYBP2-201ENST00000407745 171 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.24□□□□□ -2.45
HSPG2P98160 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.24□□□□□ -2.45
HSPG2P98160 RPL17P35-201ENST00000432217 549 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 USP9YP28-201ENST00000435142 589 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.24□□□□□ -2.45
HSPG2P98160 AC007969.2-201ENST00000441891 191 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AL606517.2-201ENST00000442855 241 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AL392103.1-201ENST00000447000 198 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.24□□□□□ -2.45
HSPG2P98160 RNU2-46P-201ENST00000517038 113 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC023827.1-201ENST00000569247 97 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 MIR3115-201ENST00000577915 68 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC006504.8-201ENST00000621046 635 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AL162726.3-218ENST00000636401 95 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.24□□□□□ -2.45
HSPG2P98160 SNORD115-24-201ENST00000363528 82 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 RNU6-127P-201ENST00000390897 107 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 RNA5SP163-201ENST00000410304 99 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 CDK8P2-201ENST00000415020 547 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 MED13P1-201ENST00000428342 171 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 MTND1P4-201ENST00000435196 415 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 RNU6-953P-201ENST00000459154 107 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 RNU7-14P-201ENST00000459331 62 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.24□□□□□ -2.45
HSPG2P98160 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.24□□□□□ -2.45
HSPG2P98160 RNU6-180P-201ENST00000516697 61 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC078795.3-201ENST00000602913 472 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AL596327.1-201ENST00000603629 213 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC022217.4-201ENST00000604389 163 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AP002360.4-201ENST00000606980 481 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC007684.1-201ENST00000609671 477 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.24□□□□□ -2.45
HSPG2P98160 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 MIR802-201ENST00000390235 94 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 SNORA26-201ENST00000391286 122 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.24□□□□□ -2.45
HSPG2P98160 MTCO3P43-201ENST00000440974 771 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC006026.2-201ENST00000457376 180 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 RNU1-117P-201ENST00000517041 158 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AC105029.1-201ENST00000520250 669 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 OR8K2P-201ENST00000524645 927 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AP003716.2-201ENST00000528260 108 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.24□□□□□ -2.45
HSPG2P98160 AC138915.2-201ENST00000569776 97 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 AL359075.3-201ENST00000613288 217 ntBASIC-0.24□□□□□ -2.45
HSPG2P98160 MIR217-201ENST00000384817 110 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.25□□□□□ -2.45
HSPG2P98160 AC016632.1-201ENST00000503994 196 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 RNU6-158P-201ENST00000517104 100 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 SNORA74.3-201ENST00000517108 154 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 RNU2-60P-201ENST00000517290 128 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.25□□□□□ -2.45
HSPG2P98160 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 AC064872.1-201ENST00000604823 1072 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 SNORD38B-202ENST00000625943 69 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.25□□□□□ -2.45
HSPG2P98160 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 MIR549A-201ENST00000385268 96 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 SNORD41-201ENST00000386967 70 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 SNORD83.1-201ENST00000411362 77 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 AL627311.1-201ENST00000431514 115 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 ZNF886P-201ENST00000450781 723 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
HSPG2P98160 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.25□□□□□ -2.45
HSPG2P98160 AC008752.3-201ENST00000588113 712 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.25□□□□□ -2.45
HSPG2P98160 AC008250.2-201ENST00000615261 205 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 USP9YP21-201ENST00000420603 432 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
HSPG2P98160 MTCO2P23-201ENST00000425216 680 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.25□□□□□ -2.45
HSPG2P98160 PCNPP5-201ENST00000452246 481 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 AL122001.1-201ENST00000457027 370 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.25□□□□□ -2.45
HSPG2P98160 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.25□□□□□ -2.45
HSPG2P98160 RNU7-128P-201ENST00000517247 62 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 AC027288.2-201ENST00000553028 243 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 AC005520.5-201ENST00000613926 164 ntBASIC-0.25□□□□□ -2.45
HSPG2P98160 SNORD56.1-201ENST00000362913 68 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 PCNPP3-201ENST00000393579 471 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 RNU6-613P-201ENST00000410412 108 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 RNU4-46P-201ENST00000410818 138 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 AC245047.3-201ENST00000429428 127 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 AL162725.1-201ENST00000435405 301 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.26□□□□□ -2.45
HSPG2P98160 SNORA27.4-201ENST00000516650 95 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms