Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLRN1P58418 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.7□□□□□ -1.98
CLRN1P58418 Y_RNA.555-201ENST00000384673 110 ntBASIC2.7□□□□□ -1.98
CLRN1P58418 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CLRN1P58418 AC024067.1-201ENST00000426199 223 ntBASIC2.7□□□□□ -1.98
CLRN1P58418 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.7□□□□□ -1.98
CLRN1P58418 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.7□□□□□ -1.98
CLRN1P58418 RNU7-57P-201ENST00000459540 60 ntBASIC2.7□□□□□ -1.98
CLRN1P58418 AC080013.2-201ENST00000460866 323 ntBASIC2.7□□□□□ -1.98
CLRN1P58418 RN7SL504P-201ENST00000494496 287 ntBASIC2.7□□□□□ -1.98
CLRN1P58418 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CLRN1P58418 MIR4753-201ENST00000585119 83 ntBASIC2.7□□□□□ -1.98
CLRN1P58418 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CLRN1P58418 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.7□□□□□ -1.98
CLRN1P58418 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.7□□□□□ -1.98
CLRN1P58418 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CLRN1P58418 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLRN1P58418 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.69□□□□□ -1.98
CLRN1P58418 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLRN1P58418 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLRN1P58418 RNU6-1272P-201ENST00000362776 107 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 Y_RNA.270-201ENST00000364693 104 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 RNU6-47P-201ENST00000383866 107 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 RNU6-211P-201ENST00000384047 107 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 AL139281.1-201ENST00000422120 335 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.69□□□□□ -1.98
CLRN1P58418 RPL23AP58-201ENST00000440453 469 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 AL161788.1-201ENST00000441805 169 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 snoU13.22-201ENST00000459428 104 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 RN7SL75P-201ENST00000461926 281 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 AC107393.1-201ENST00000512403 346 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 RN7SKP43-201ENST00000516173 320 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.69□□□□□ -1.98
CLRN1P58418 AP002392.1-201ENST00000537692 208 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.69□□□□□ -1.98
CLRN1P58418 MIR5004-201ENST00000579078 107 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 Z83818.1-201ENST00000603584 150 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 MIR1248-201ENST00000629190 106 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLRN1P58418 Z82209.1-201ENST00000422141 2135 ntBASIC2.69□□□□□ -1.98
CLRN1P58418 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.69□□□□□ -1.98
CLRN1P58418 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLRN1P58418 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.68□□□□□ -1.98
CLRN1P58418 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLRN1P58418 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLRN1P58418 RNU6-546P-201ENST00000383991 107 ntBASIC2.68□□□□□ -1.98
CLRN1P58418 RNU2-32P-201ENST00000411193 191 ntBASIC2.68□□□□□ -1.98
CLRN1P58418 BTF3P11-201ENST00000426582 477 ntBASIC2.68□□□□□ -1.98
CLRN1P58418 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.68□□□□□ -1.98
CLRN1P58418 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.68□□□□□ -1.98
CLRN1P58418 RNU7-120P-201ENST00000459334 63 ntBASIC2.68□□□□□ -1.98
CLRN1P58418 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.68□□□□□ -1.98
CLRN1P58418 CKS1BP2-201ENST00000497342 240 ntBASIC2.68□□□□□ -1.98
CLRN1P58418 RNY3P16-201ENST00000516338 101 ntBASIC2.68□□□□□ -1.98
CLRN1P58418 SNORA31.26-201ENST00000517250 137 ntBASIC2.68□□□□□ -1.98
CLRN1P58418 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.68□□□□□ -1.98
CLRN1P58418 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.68□□□□□ -1.98
CLRN1P58418 AL008718.3-201ENST00000610217 321 ntBASIC2.68□□□□□ -1.98
CLRN1P58418 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.68□□□□□ -1.98
CLRN1P58418 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CLRN1P58418 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
CLRN1P58418 AC108206.1-201ENST00000570186 4159 ntBASIC2.68□□□□□ -1.98
CLRN1P58418 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.68□□□□□ -1.98
CLRN1P58418 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.68□□□□□ -1.98
CLRN1P58418 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
CLRN1P58418 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
CLRN1P58418 RNU6-1020P-201ENST00000363684 107 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 SNORA71.1-201ENST00000364523 117 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 SNORD31B-201ENST00000364977 69 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 RNU6-1062P-201ENST00000383908 107 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 RNU6-975P-201ENST00000384296 105 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 SNORD14D-201ENST00000384390 87 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 AC022018.1-201ENST00000430685 241 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 RPL23AP83-201ENST00000434984 473 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 AC009969.1-201ENST00000438726 172 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 AC016717.1-201ENST00000448918 286 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.67□□□□□ -1.98
CLRN1P58418 BX510359.1-201ENST00000456973 237 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 CYP2C59P-201ENST00000457790 269 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 Y_RNA.637-201ENST00000459424 114 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 AC114982.1-201ENST00000469402 321 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.67□□□□□ -1.98
CLRN1P58418 AC009127.3-201ENST00000570531 403 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.67□□□□□ -1.98
CLRN1P58418 AL365265.1-201ENST00000621045 234 ntBASIC2.67□□□□□ -1.98
CLRN1P58418 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.67□□□□□ -1.98
CLRN1P58418 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CLRN1P58418 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLRN1P58418 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.66□□□□□ -1.98
CLRN1P58418 RNU1-23P-201ENST00000363361 144 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 RNU6-801P-201ENST00000364087 105 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 RNU6-743P-201ENST00000364151 106 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 RNU6-923P-201ENST00000364753 107 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 Y_RNA.308-201ENST00000365043 101 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 Y_RNA.333-201ENST00000365274 102 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 RNU6-886P-201ENST00000384319 105 ntBASIC2.66□□□□□ -1.98
CLRN1P58418 MIR95-201ENST00000385072 81 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms