Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL139281.1-201ENST00000422120 335 ntBASIC3.63□□□□□ -1.83
ERCC3P19447 AC009238.1-201ENST00000442165 424 ntBASIC3.63□□□□□ -1.83
ERCC3P19447 AC009237.6-201ENST00000446969 424 ntBASIC3.63□□□□□ -1.83
ERCC3P19447 RNU6-966P-201ENST00000516479 104 ntBASIC3.63□□□□□ -1.83
ERCC3P19447 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.63□□□□□ -1.83
ERCC3P19447 uc_338.25-201ENST00000613756 156 ntBASIC3.63□□□□□ -1.83
ERCC3P19447 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ERCC3P19447 Y_RNA.65-201ENST00000362846 100 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 Y_RNA.277-201ENST00000364754 102 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 RNU6-1318P-201ENST00000365389 103 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 U8.9-201ENST00000365667 134 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 SNORA54-201ENST00000384281 123 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 AL603910.2-201ENST00000407268 136 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 RNA5SP492-201ENST00000411330 114 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.62□□□□□ -1.83
ERCC3P19447 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.62□□□□□ -1.83
ERCC3P19447 HMGN1P18-201ENST00000457642 277 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.62□□□□□ -1.83
ERCC3P19447 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ERCC3P19447 SNORA64.4-201ENST00000516632 81 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.62□□□□□ -1.83
ERCC3P19447 AC007536.1-201ENST00000533382 349 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.62□□□□□ -1.83
ERCC3P19447 AL512605.2-201ENST00000592972 256 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 AL590240.4-201ENST00000616908 390 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.62□□□□□ -1.83
ERCC3P19447 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ERCC3P19447 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ERCC3P19447 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
ERCC3P19447 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.61□□□□□ -1.83
ERCC3P19447 RNU6-1266P-201ENST00000362794 105 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 RNU6-326P-201ENST00000365480 107 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ERCC3P19447 SNORA26.7-201ENST00000391288 122 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 AL139095.1-201ENST00000404326 391 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.61□□□□□ -1.83
ERCC3P19447 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
ERCC3P19447 NDUFB4P10-201ENST00000452541 359 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 AL137159.1-201ENST00000452808 512 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 RNU7-26P-201ENST00000458980 63 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 AC021205.2-201ENST00000480069 347 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 RNU6-948P-201ENST00000516374 107 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 AC245166.1-201ENST00000521012 253 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 AC027419.1-201ENST00000522976 328 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 PRELID2P1-201ENST00000552837 301 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.61□□□□□ -1.83
ERCC3P19447 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.61□□□□□ -1.83
ERCC3P19447 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 snoZ196.1-201ENST00000625269 89 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 MIR622-201ENST00000638396 96 ntBASIC3.61□□□□□ -1.83
ERCC3P19447 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
ERCC3P19447 MIR410-201ENST00000362222 80 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 SNORA5B-201ENST00000363786 132 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 SNORA38-201ENST00000363946 132 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 SNORA71.1-201ENST00000364523 117 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 Y_RNA.329-201ENST00000365209 107 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 SNORA25B-201ENST00000365507 128 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 Y_RNA.416-201ENST00000384014 113 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 RNU6-975P-201ENST00000384296 105 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 MIR1185-2-201ENST00000408687 86 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 U3.40-201ENST00000408706 208 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 RNA5SP344-201ENST00000411081 104 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.6□□□□□ -1.83
ERCC3P19447 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.6□□□□□ -1.83
ERCC3P19447 RNU6-1023P-201ENST00000516137 106 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 DEFB117-201ENST00000602356 141 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 AC078938.1-201ENST00000620993 318 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.6□□□□□ -1.83
ERCC3P19447 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.6□□□□□ -1.83
ERCC3P19447 AC093010.3-201ENST00000570269 15214 ntBASIC3.6□□□□□ -1.83
ERCC3P19447 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.59□□□□□ -1.83
ERCC3P19447 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ERCC3P19447 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
ERCC3P19447 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
ERCC3P19447 RNU1-91P-201ENST00000364746 163 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 Y_RNA.352-201ENST00000365439 102 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 Y_RNA.562-201ENST00000384695 113 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 AC024067.1-201ENST00000426199 223 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 AC244505.4-201ENST00000434905 287 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 CST9LP2-201ENST00000437612 320 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 SSXP5-201ENST00000443473 287 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 AL139109.1-201ENST00000455491 297 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 AC093259.1-201ENST00000509755 300 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 SNORA4.4-201ENST00000515921 135 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 RPPH1-2P-201ENST00000516688 293 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 RPL21P9-201ENST00000556149 474 ntBASIC3.59□□□□□ -1.83
ERCC3P19447 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
ERCC3P19447 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.58□□□□□ -1.84
ERCC3P19447 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ERCC3P19447 Y_RNA.44-201ENST00000362676 108 ntBASIC3.58□□□□□ -1.84
ERCC3P19447 RNU4-80P-201ENST00000363200 141 ntBASIC3.58□□□□□ -1.84
ERCC3P19447 RNU1-109P-201ENST00000383960 147 ntBASIC3.58□□□□□ -1.84
ERCC3P19447 SNORD15B-201ENST00000384714 146 ntBASIC3.58□□□□□ -1.84
ERCC3P19447 RNU6-1199P-201ENST00000411249 104 ntBASIC3.58□□□□□ -1.84
ERCC3P19447 AC016925.1-201ENST00000458303 298 ntBASIC3.58□□□□□ -1.84
ERCC3P19447 MTND1P19-201ENST00000511780 315 ntBASIC3.58□□□□□ -1.84
ERCC3P19447 RNU2-12P-201ENST00000517216 168 ntBASIC3.58□□□□□ -1.84
ERCC3P19447 SCARNA20.6-201ENST00000517251 106 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms