Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC091152.2-201ENST00000591628 2569 ntBASIC3.59□□□□□ -1.83
PDGFAP04085 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PDGFAP04085 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PDGFAP04085 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
PDGFAP04085 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFAP04085 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFAP04085 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFAP04085 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFAP04085 Y_RNA.521-201ENST00000384560 114 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 RNA5SP496-201ENST00000391240 109 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 AL512604.1-201ENST00000404812 257 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 RNU4-43P-201ENST00000410628 137 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 RNU6-1328P-201ENST00000410938 106 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 MTND4LP9-201ENST00000427694 174 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 AC009969.1-201ENST00000438726 172 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 RPS27P1-201ENST00000450552 247 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 HMGN2P18-201ENST00000450680 270 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 RN7SL330P-201ENST00000469709 307 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 CKS1BP2-201ENST00000497342 240 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 RNA5SP490-201ENST00000517141 136 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 XIST_intron.1-201ENST00000619444 68 ntBASIC3.58□□□□□ -1.84
PDGFAP04085 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.58□□□□□ -1.84
PDGFAP04085 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDGFAP04085 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
PDGFAP04085 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
PDGFAP04085 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
PDGFAP04085 RNU6-674P-201ENST00000363831 107 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 MIR539-201ENST00000365690 78 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PDGFAP04085 MIR181A2-201ENST00000384863 110 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PDGFAP04085 SNORA11.2-201ENST00000408318 127 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 SNORA79-201ENST00000408376 140 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 RNU6-735P-201ENST00000410612 107 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 RNU2-32P-201ENST00000411193 191 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 DBIP2-201ENST00000419076 262 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFAP04085 AC083863.1-201ENST00000438811 231 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 RPL23AP58-201ENST00000440453 469 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFAP04085 CYP2C59P-201ENST00000457790 269 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 AC010531.2-201ENST00000465012 153 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 RPS27P22-201ENST00000478056 241 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 AC106707.2-201ENST00000484182 374 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 RNU6-63P-201ENST00000516690 95 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFAP04085 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.57□□□□□ -1.84
PDGFAP04085 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFAP04085 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.57□□□□□ -1.84
PDGFAP04085 U3.45-201ENST00000607547 219 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 AC012640.5-201ENST00000623897 319 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 MIR1248-201ENST00000629190 106 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 MIR6844-201ENST00000637122 62 ntBASIC3.57□□□□□ -1.84
PDGFAP04085 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDGFAP04085 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDGFAP04085 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFAP04085 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.57□□□□□ -1.84
PDGFAP04085 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.57□□□□□ -1.84
PDGFAP04085 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFAP04085 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.56□□□□□ -1.84
PDGFAP04085 AC080128.1-201ENST00000474389 1917 ntBASIC3.56□□□□□ -1.84
PDGFAP04085 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFAP04085 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFAP04085 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFAP04085 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PDGFAP04085 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFAP04085 CENPCP1-201ENST00000533085 2578 ntBASIC3.56□□□□□ -1.84
PDGFAP04085 Y_RNA.420-201ENST00000384043 110 ntBASIC3.56□□□□□ -1.84
PDGFAP04085 FO393413.1-201ENST00000402892 195 ntBASIC3.56□□□□□ -1.84
PDGFAP04085 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.56□□□□□ -1.84
PDGFAP04085 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.56□□□□□ -1.84
PDGFAP04085 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.56□□□□□ -1.84
PDGFAP04085 AC093732.2-201ENST00000607950 274 ntBASIC3.56□□□□□ -1.84
PDGFAP04085 MIR7975-201ENST00000619350 68 ntBASIC3.56□□□□□ -1.84
PDGFAP04085 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDGFAP04085 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.56□□□□□ -1.84
PDGFAP04085 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PDGFAP04085 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFAP04085 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PDGFAP04085 RNU4-41P-201ENST00000364426 143 ntBASIC3.55□□□□□ -1.84
PDGFAP04085 RNA5SP72-201ENST00000364442 117 ntBASIC3.55□□□□□ -1.84
PDGFAP04085 RNA5SP51-201ENST00000364750 119 ntBASIC3.55□□□□□ -1.84
PDGFAP04085 Y_RNA.393-201ENST00000383936 102 ntBASIC3.55□□□□□ -1.84
PDGFAP04085 SNORA20-201ENST00000384662 132 ntBASIC3.55□□□□□ -1.84
PDGFAP04085 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PDGFAP04085 RN7SKP101-201ENST00000411376 320 ntBASIC3.55□□□□□ -1.84
PDGFAP04085 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PDGFAP04085 AC080013.2-201ENST00000460866 323 ntBASIC3.55□□□□□ -1.84
PDGFAP04085 AC090515.1-201ENST00000465295 476 ntBASIC3.55□□□□□ -1.84
PDGFAP04085 RNU6-971P-201ENST00000516920 106 ntBASIC3.55□□□□□ -1.84
PDGFAP04085 TUG1_4.1-201ENST00000619464 181 ntBASIC3.55□□□□□ -1.84
PDGFAP04085 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PDGFAP04085 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.55□□□□□ -1.84
PDGFAP04085 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PDGFAP04085 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
PDGFAP04085 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFAP04085 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDGFAP04085 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.54□□□□□ -1.84
PDGFAP04085 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms