Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.26□□□□□ -1.73
ALDH1A1P00352 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ALDH1A1P00352 AL589743.1-201ENST00000551932 2712 ntBASIC4.26□□□□□ -1.73
ALDH1A1P00352 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ALDH1A1P00352 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALDH1A1P00352 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ALDH1A1P00352 HDGFP1-201ENST00000405943 252 ntBASIC4.26□□□□□ -1.73
ALDH1A1P00352 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.26□□□□□ -1.73
ALDH1A1P00352 AL161651.1-201ENST00000440882 223 ntBASIC4.26□□□□□ -1.73
ALDH1A1P00352 RPL23AP62-201ENST00000463396 453 ntBASIC4.26□□□□□ -1.73
ALDH1A1P00352 AC083906.5-201ENST00000503722 328 ntBASIC4.26□□□□□ -1.73
ALDH1A1P00352 MALAT1.1-201ENST00000618249 95 ntBASIC4.26□□□□□ -1.73
ALDH1A1P00352 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ALDH1A1P00352 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.26□□□□□ -1.73
ALDH1A1P00352 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALDH1A1P00352 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALDH1A1P00352 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ALDH1A1P00352 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ALDH1A1P00352 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.26□□□□□ -1.73
ALDH1A1P00352 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALDH1A1P00352 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.25□□□□□ -1.73
ALDH1A1P00352 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ALDH1A1P00352 MIR494-201ENST00000349529 81 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 RNU6-1010P-201ENST00000362757 107 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 RNU6-271P-201ENST00000363858 105 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 RNU6-813P-201ENST00000384691 107 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 RNA5SP424-201ENST00000390988 115 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 SNORA26-201ENST00000391286 122 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 AL139095.1-201ENST00000404326 391 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 AL133475.1-201ENST00000404414 305 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 RPS3P1-201ENST00000456781 192 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 AC023141.12-201ENST00000512399 199 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 RNA5SP395-201ENST00000516567 118 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 AC015720.1-201ENST00000565251 277 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 RPS15AP11-201ENST00000594193 385 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 SNORD115-40-201ENST00000606510 82 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.25□□□□□ -1.73
ALDH1A1P00352 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ALDH1A1P00352 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ALDH1A1P00352 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ALDH1A1P00352 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
ALDH1A1P00352 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.24□□□□□ -1.73
ALDH1A1P00352 HMGN2P9-201ENST00000476875 229 ntBASIC4.24□□□□□ -1.73
ALDH1A1P00352 AC078918.1-201ENST00000498515 228 ntBASIC4.24□□□□□ -1.73
ALDH1A1P00352 RNU6-113P-201ENST00000516653 101 ntBASIC4.24□□□□□ -1.73
ALDH1A1P00352 AC100770.1-201ENST00000532310 322 ntBASIC4.24□□□□□ -1.73
ALDH1A1P00352 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.24□□□□□ -1.73
ALDH1A1P00352 AL929325.1-201ENST00000603096 117 ntBASIC4.24□□□□□ -1.73
ALDH1A1P00352 AP000553.6-201ENST00000641242 118 ntBASIC4.24□□□□□ -1.73
ALDH1A1P00352 AC103988.1-201ENST00000566382 2177 ntBASIC4.24□□□□□ -1.73
ALDH1A1P00352 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ALDH1A1P00352 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALDH1A1P00352 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.24□□□□□ -1.73
ALDH1A1P00352 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
ALDH1A1P00352 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ALDH1A1P00352 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ALDH1A1P00352 RNU6-228P-201ENST00000362700 106 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 Y_RNA.66-201ENST00000362862 102 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 RNY1P10-201ENST00000363268 113 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 SNORA7.2-201ENST00000364446 145 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 AC017083.1-201ENST00000428093 483 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.23□□□□□ -1.73
ALDH1A1P00352 SNORD11-201ENST00000459124 84 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 AP000873.1-201ENST00000463987 400 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 RNU6-63P-201ENST00000516690 95 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 RNU6-928P-201ENST00000516876 104 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.23□□□□□ -1.73
ALDH1A1P00352 RPL23AP91-201ENST00000569211 455 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 MIR7112-201ENST00000616126 65 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 MIR2052-201ENST00000636055 55 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 MIR3199-2-201ENST00000636243 86 ntBASIC4.23□□□□□ -1.73
ALDH1A1P00352 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.23□□□□□ -1.73
ALDH1A1P00352 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ALDH1A1P00352 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ALDH1A1P00352 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ALDH1A1P00352 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ALDH1A1P00352 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ALDH1A1P00352 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALDH1A1P00352 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.22□□□□□ -1.73
ALDH1A1P00352 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.22□□□□□ -1.73
ALDH1A1P00352 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.22□□□□□ -1.73
ALDH1A1P00352 SNORA51.4-201ENST00000364993 124 ntBASIC4.22□□□□□ -1.73
ALDH1A1P00352 RPL23AP48-201ENST00000406913 488 ntBASIC4.22□□□□□ -1.73
ALDH1A1P00352 SNORA19.1-201ENST00000410656 129 ntBASIC4.22□□□□□ -1.73
ALDH1A1P00352 RNA5SP225-201ENST00000410874 135 ntBASIC4.22□□□□□ -1.73
ALDH1A1P00352 SNORD65B-201ENST00000459126 73 ntBASIC4.22□□□□□ -1.73
ALDH1A1P00352 AC107626.1-201ENST00000471084 183 ntBASIC4.22□□□□□ -1.73
ALDH1A1P00352 EIF4BP1-201ENST00000554881 351 ntBASIC4.22□□□□□ -1.73
ALDH1A1P00352 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.22□□□□□ -1.73
ALDH1A1P00352 RNU6-91P-201ENST00000607774 107 ntBASIC4.22□□□□□ -1.73
ALDH1A1P00352 AL137067.1-201ENST00000615933 120 ntBASIC4.22□□□□□ -1.73
ALDH1A1P00352 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.22□□□□□ -1.73
ALDH1A1P00352 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
ALDH1A1P00352 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ALDH1A1P00352 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.22□□□□□ -1.73
ALDH1A1P00352 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ALDH1A1P00352 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ALDH1A1P00352 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ALDH1A1P00352 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.22□□□□□ -1.73
ALDH1A1P00352 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms