Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 Y_RNA.357-201ENST00000365487 109 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 RNU6-763P-201ENST00000390865 106 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 RNA5SP201-201ENST00000410316 124 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.06□□□□□ -1.92
CNOT4O95628 AL162725.1-201ENST00000435405 301 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 SEPT7P4-201ENST00000437076 306 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 AL357552.1-201ENST00000445254 415 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.06□□□□□ -1.92
CNOT4O95628 SNORA70.18-201ENST00000516696 98 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 AC100767.1-201ENST00000528178 123 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 AC027176.1-201ENST00000560204 514 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 AL356280.1-201ENST00000603614 379 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 SNORD11B-201ENST00000607707 90 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.06□□□□□ -1.92
CNOT4O95628 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.06□□□□□ -1.92
CNOT4O95628 PCGEM1.1-201ENST00000613431 131 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 AL449363.1-201ENST00000617815 186 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 AC091895.1-201ENST00000624494 256 ntBASIC3.06□□□□□ -1.92
CNOT4O95628 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CNOT4O95628 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CNOT4O95628 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CNOT4O95628 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CNOT4O95628 AC080128.1-201ENST00000474389 1917 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CNOT4O95628 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CNOT4O95628 Y_RNA.40-201ENST00000362645 93 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 RNU6-1010P-201ENST00000362757 107 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 RNU6-22P-201ENST00000384355 107 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 RNU6-959P-201ENST00000384671 107 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 RNU6-131P-201ENST00000391144 107 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 snoU13.14-201ENST00000459372 104 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 AP001486.1-201ENST00000463339 476 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 AC112771.1-201ENST00000463581 102 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 AL049873.1-201ENST00000480540 376 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 RNU6-344P-201ENST00000516635 111 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 SNORA70.19-201ENST00000516717 90 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 SCARNA3-201ENST00000517097 143 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 RNA5SP380-201ENST00000517190 98 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.05□□□□□ -1.92
CNOT4O95628 AC026333.2-201ENST00000542164 106 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.05□□□□□ -1.92
CNOT4O95628 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.05□□□□□ -1.92
CNOT4O95628 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.05□□□□□ -1.92
CNOT4O95628 AL078604.3-201ENST00000615580 211 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 AC005562.2-201ENST00000618264 111 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 MIR8057-201ENST00000620957 69 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 AC018692.3-201ENST00000623929 123 ntBASIC3.05□□□□□ -1.92
CNOT4O95628 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CNOT4O95628 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CNOT4O95628 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.05□□□□□ -1.92
CNOT4O95628 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CNOT4O95628 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CNOT4O95628 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
CNOT4O95628 RNU6-529P-201ENST00000363383 104 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 Y_RNA.215-201ENST00000364204 112 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 SNORD87-201ENST00000364849 89 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 RNU6-417P-201ENST00000384712 107 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 Y_RNA.568-201ENST00000384742 113 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 MIR186-201ENST00000384988 86 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 SNORD17-201ENST00000390930 237 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 MIR887-201ENST00000401258 79 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 AC004866.1-201ENST00000411748 78 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 AC097463.2-201ENST00000421074 142 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 AC027124.2-201ENST00000428249 105 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.04□□□□□ -1.92
CNOT4O95628 RPS20P10-201ENST00000451209 253 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 RNU6-62P-201ENST00000516526 102 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 EIF4A1P12-201ENST00000551910 141 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 AC012493.2-201ENST00000595083 291 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 RMST_8.1-201ENST00000610287 165 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 TCL6_2.1-201ENST00000615162 119 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 U4.6-201ENST00000621618 127 ntBASIC3.04□□□□□ -1.92
CNOT4O95628 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CNOT4O95628 AL365361.1-201ENST00000566942 3481 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 RNU4-35P-201ENST00000362588 141 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 SNORD114-19-201ENST00000363072 75 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 RNU6-275P-201ENST00000364910 107 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 RNU6-381P-201ENST00000391259 108 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 RNU6-1328P-201ENST00000410938 106 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 DBIP2-201ENST00000419076 262 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 AIMP1P2-201ENST00000425294 312 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 AC004386.2-201ENST00000441858 148 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 U8.19-201ENST00000459095 133 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 AC025518.1-201ENST00000479856 347 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.03□□□□□ -1.92
CNOT4O95628 RNA5SP385-201ENST00000515947 110 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 RNU6-479P-201ENST00000516348 105 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 SNORD116-25-201ENST00000516517 92 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 MIR4513-201ENST00000581077 86 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 AC022149.2-201ENST00000621061 203 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 AC068205.3-201ENST00000636385 468 ntBASIC3.03□□□□□ -1.92
CNOT4O95628 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CNOT4O95628 AC017071.1-201ENST00000564407 2204 ntBASIC3.03□□□□□ -1.93
CNOT4O95628 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CNOT4O95628 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CNOT4O95628 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CNOT4O95628 RNU4-15P-201ENST00000362613 141 ntBASIC3.02□□□□□ -1.93
CNOT4O95628 U3.9-201ENST00000363823 204 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms