Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 Y_RNA.556-201ENST00000384677 113 ntBASIC3.36□□□□□ -1.87
RAPGEF3O95398 MIR568-201ENST00000385036 95 ntBASIC3.36□□□□□ -1.87
RAPGEF3O95398 MRPL35P1-201ENST00000404272 572 ntBASIC3.36□□□□□ -1.87
RAPGEF3O95398 AL445646.1-201ENST00000431784 216 ntBASIC3.36□□□□□ -1.87
RAPGEF3O95398 AL731563.1-201ENST00000442202 214 ntBASIC3.36□□□□□ -1.87
RAPGEF3O95398 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.36□□□□□ -1.87
RAPGEF3O95398 RNU6-897P-201ENST00000517135 105 ntBASIC3.36□□□□□ -1.87
RAPGEF3O95398 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.36□□□□□ -1.87
RAPGEF3O95398 RPL17P51-201ENST00000605218 238 ntBASIC3.36□□□□□ -1.87
RAPGEF3O95398 Y_RNA.772-201ENST00000606692 102 ntBASIC3.36□□□□□ -1.87
RAPGEF3O95398 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RAPGEF3O95398 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.36□□□□□ -1.87
RAPGEF3O95398 ZNF204P-201ENST00000416749 2397 ntBASIC3.36□□□□□ -1.87
RAPGEF3O95398 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.35□□□□□ -1.87
RAPGEF3O95398 snoU2_19.1-201ENST00000362361 80 ntBASIC3.35□□□□□ -1.87
RAPGEF3O95398 RNU6-873P-201ENST00000363833 107 ntBASIC3.35□□□□□ -1.87
RAPGEF3O95398 Y_RNA.214-201ENST00000364201 112 ntBASIC3.35□□□□□ -1.87
RAPGEF3O95398 SNORD56.5-201ENST00000364281 72 ntBASIC3.35□□□□□ -1.87
RAPGEF3O95398 Y_RNA.439-201ENST00000384119 94 ntBASIC3.35□□□□□ -1.87
RAPGEF3O95398 Y_RNA.452-201ENST00000384202 108 ntBASIC3.35□□□□□ -1.87
RAPGEF3O95398 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.35□□□□□ -1.87
RAPGEF3O95398 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.35□□□□□ -1.87
RAPGEF3O95398 AL161670.1-201ENST00000554348 137 ntBASIC3.35□□□□□ -1.87
RAPGEF3O95398 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.35□□□□□ -1.87
RAPGEF3O95398 AC240442.1-201ENST00000616055 283 ntBASIC3.35□□□□□ -1.87
RAPGEF3O95398 U4.1-201ENST00000620349 87 ntBASIC3.35□□□□□ -1.87
RAPGEF3O95398 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.35□□□□□ -1.87
RAPGEF3O95398 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RAPGEF3O95398 RNU1-62P-201ENST00000362599 164 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 RNU6-770P-201ENST00000363929 105 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 RNU6-1145P-201ENST00000384246 107 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 MIR499A-201ENST00000384903 122 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 MIR329-1-201ENST00000385028 80 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 SNORA46.1-201ENST00000391069 153 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 RNU6-1328P-201ENST00000410938 106 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 AC080013.2-201ENST00000460866 323 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 AC073901.1-201ENST00000462471 408 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.34□□□□□ -1.87
RAPGEF3O95398 RNU6-56P-201ENST00000516986 93 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.34□□□□□ -1.87
RAPGEF3O95398 AC004817.2-201ENST00000561794 651 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 MIR4503-201ENST00000582187 83 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 AC010999.1-201ENST00000611856 324 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 MIR8070-201ENST00000616510 88 ntBASIC3.34□□□□□ -1.87
RAPGEF3O95398 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
RAPGEF3O95398 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAPGEF3O95398 RNU6-238P-201ENST00000363313 106 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 RNU6-713P-201ENST00000384761 107 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 SNORD12B-201ENST00000410433 91 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 RNU6-321P-201ENST00000410912 106 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.33□□□□□ -1.88
RAPGEF3O95398 RPL30P4-201ENST00000429309 333 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.33□□□□□ -1.88
RAPGEF3O95398 AC007395.1-201ENST00000451333 677 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.33□□□□□ -1.88
RAPGEF3O95398 SNORA25.14-201ENST00000516481 132 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 MIR4659A-201ENST00000580269 81 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 MIR3616-201ENST00000584070 92 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 MIR3149-201ENST00000584629 83 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 MIR6766-201ENST00000622641 72 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 AC130454.1-201ENST00000622948 401 ntBASIC3.33□□□□□ -1.88
RAPGEF3O95398 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAPGEF3O95398 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.32□□□□□ -1.88
RAPGEF3O95398 MIR21-201ENST00000362134 72 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 RNA5SP361-201ENST00000362686 118 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 Y_RNA.179-201ENST00000363844 90 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 RNU2-25P-201ENST00000411041 191 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 RNU6-130P-201ENST00000411112 103 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 RNU6-1001P-201ENST00000411265 100 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 ELOCP20-201ENST00000422460 345 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.32□□□□□ -1.88
RAPGEF3O95398 IPO7P1-201ENST00000442031 636 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 DYNLT3P2-201ENST00000442517 295 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.32□□□□□ -1.88
RAPGEF3O95398 AC011753.1-201ENST00000451001 220 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 Y_RNA.683-201ENST00000516508 93 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 AC105245.1-201ENST00000581934 244 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 AC069294.1-201ENST00000608397 350 ntBASIC3.32□□□□□ -1.88
RAPGEF3O95398 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.32□□□□□ -1.88
RAPGEF3O95398 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.32□□□□□ -1.88
RAPGEF3O95398 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.32□□□□□ -1.88
RAPGEF3O95398 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RAPGEF3O95398 Y_RNA.19-201ENST00000362462 99 ntBASIC3.31□□□□□ -1.88
RAPGEF3O95398 RNU6-1180P-201ENST00000364935 107 ntBASIC3.31□□□□□ -1.88
RAPGEF3O95398 RNU6-793P-201ENST00000384233 104 ntBASIC3.31□□□□□ -1.88
RAPGEF3O95398 MIR627-201ENST00000384979 97 ntBASIC3.31□□□□□ -1.88
RAPGEF3O95398 UBBP3-201ENST00000445497 241 ntBASIC3.31□□□□□ -1.88
RAPGEF3O95398 AC140059.1-201ENST00000489238 361 ntBASIC3.31□□□□□ -1.88
RAPGEF3O95398 RNU6-397P-201ENST00000516226 104 ntBASIC3.31□□□□□ -1.88
RAPGEF3O95398 RNY3P15-201ENST00000516297 97 ntBASIC3.31□□□□□ -1.88
RAPGEF3O95398 SCARNA16.3-201ENST00000516595 184 ntBASIC3.31□□□□□ -1.88
RAPGEF3O95398 MYL12BP1-201ENST00000569826 507 ntBASIC3.31□□□□□ -1.88
RAPGEF3O95398 TCL6_2.1-201ENST00000615162 119 ntBASIC3.31□□□□□ -1.88
RAPGEF3O95398 AC005562.2-201ENST00000618264 111 ntBASIC3.31□□□□□ -1.88
RAPGEF3O95398 FO393413.1-201ENST00000402892 195 ntBASIC3.3□□□□□ -1.88
RAPGEF3O95398 MIR3199-1-201ENST00000582434 88 ntBASIC3.3□□□□□ -1.88
RAPGEF3O95398 AC107871.2-201ENST00000612894 502 ntBASIC3.3□□□□□ -1.88
RAPGEF3O95398 AL449363.1-201ENST00000617815 186 ntBASIC3.3□□□□□ -1.88
RAPGEF3O95398 MIR8062-201ENST00000621515 85 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms