Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL049779.4-201ENST00000604500 156 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 YPEL5P2-201ENST00000605553 359 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC66A2RUB6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC66A2RUB6 AC008873.1-201ENST00000625051 138 ntBASIC3.14□□□□□ -1.91
CCDC66A2RUB6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC66A2RUB6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC66A2RUB6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC66A2RUB6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC66A2RUB6 MIR22-201ENST00000362190 85 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 Y_RNA.269-201ENST00000364685 89 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 SNORA67.2-201ENST00000384300 149 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 RNU6-1274P-201ENST00000384557 107 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 RNU6-1199P-201ENST00000411249 104 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 RNU2-64P-201ENST00000411315 191 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 AL513477.1-202ENST00000417061 214 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 AC009963.1-201ENST00000417265 157 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 MTCO1P5-201ENST00000433573 344 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 RPS29P2-201ENST00000479278 136 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 RN7SL504P-201ENST00000494496 287 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC66A2RUB6 AC083906.5-201ENST00000503722 328 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 RNU6-155P-201ENST00000516347 100 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 SCARNA13-201ENST00000516672 275 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC66A2RUB6 MIR4643-201ENST00000577473 78 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 AC105245.1-201ENST00000581934 244 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 AC005000.2-201ENST00000605468 310 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 MIR8057-201ENST00000620957 69 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 FO624990.1-201ENST00000636373 85 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 AC092593.1-201ENST00000515413 1815 ntBASIC3.13□□□□□ -1.91
CCDC66A2RUB6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC66A2RUB6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC66A2RUB6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC66A2RUB6 MIR218-1-201ENST00000384999 110 ntBASIC3.12□□□□□ -1.91
CCDC66A2RUB6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC66A2RUB6 NDUFB4P10-201ENST00000452541 359 ntBASIC3.12□□□□□ -1.91
CCDC66A2RUB6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC66A2RUB6 AC091959.1-201ENST00000495857 238 ntBASIC3.12□□□□□ -1.91
CCDC66A2RUB6 RNU5F-4P-201ENST00000516581 114 ntBASIC3.12□□□□□ -1.91
CCDC66A2RUB6 RNU6-1098P-201ENST00000516772 96 ntBASIC3.12□□□□□ -1.91
CCDC66A2RUB6 RNU6-586P-201ENST00000517265 104 ntBASIC3.12□□□□□ -1.91
CCDC66A2RUB6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC66A2RUB6 MIR4446-201ENST00000578505 67 ntBASIC3.12□□□□□ -1.91
CCDC66A2RUB6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC66A2RUB6 AC006380.1-201ENST00000603598 186 ntBASIC3.12□□□□□ -1.91
CCDC66A2RUB6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.12□□□□□ -1.91
CCDC66A2RUB6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC66A2RUB6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC66A2RUB6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC66A2RUB6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC66A2RUB6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC66A2RUB6 RNA5SP393-201ENST00000363423 117 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 U3.8-201ENST00000363675 217 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 RNU6-944P-201ENST00000364023 107 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 Y_RNA.275-201ENST00000364726 110 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 RNU6-740P-201ENST00000364734 105 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 RNU1-138P-201ENST00000384093 164 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 MIR1294-201ENST00000408503 142 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC66A2RUB6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC66A2RUB6 TOMM22P2-201ENST00000430735 237 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC66A2RUB6 Y_RNA.700-201ENST00000516806 100 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 RNU2-12P-201ENST00000517216 168 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC66A2RUB6 AC022080.3-201ENST00000544433 482 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 AC130289.1-201ENST00000577321 73 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 AL162424.1-201ENST00000602325 221 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 AC069294.1-201ENST00000608397 350 ntBASIC3.11□□□□□ -1.91
CCDC66A2RUB6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC66A2RUB6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCDC66A2RUB6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC66A2RUB6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC66A2RUB6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC66A2RUB6 MIR6073-201ENST00000352083 89 ntBASIC3.1□□□□□ -1.91
CCDC66A2RUB6 UBE2WP1-201ENST00000362030 340 ntBASIC3.1□□□□□ -1.91
CCDC66A2RUB6 MIR586-201ENST00000385035 97 ntBASIC3.1□□□□□ -1.91
CCDC66A2RUB6 AL139156.1-201ENST00000412785 841 ntBASIC3.1□□□□□ -1.91
CCDC66A2RUB6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC66A2RUB6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC66A2RUB6 CR769767.1-201ENST00000436337 346 ntBASIC3.1□□□□□ -1.91
CCDC66A2RUB6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC66A2RUB6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC66A2RUB6 SNORA27.4-201ENST00000516650 95 ntBASIC3.1□□□□□ -1.91
CCDC66A2RUB6 RPL21P9-201ENST00000556149 474 ntBASIC3.1□□□□□ -1.91
CCDC66A2RUB6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC66A2RUB6 AC080128.1-201ENST00000474389 1917 ntBASIC3.1□□□□□ -1.91
CCDC66A2RUB6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC66A2RUB6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC66A2RUB6 Y_RNA.200-201ENST00000364018 102 ntBASIC3.09□□□□□ -1.91
CCDC66A2RUB6 RNU6-454P-201ENST00000364292 107 ntBASIC3.09□□□□□ -1.91
CCDC66A2RUB6 SNORA54-201ENST00000384281 123 ntBASIC3.09□□□□□ -1.91
CCDC66A2RUB6 Y_RNA.785-201ENST00000384290 109 ntBASIC3.09□□□□□ -1.91
CCDC66A2RUB6 MIR128-1-201ENST00000384921 82 ntBASIC3.09□□□□□ -1.91
CCDC66A2RUB6 SNORA48.2-201ENST00000390926 124 ntBASIC3.09□□□□□ -1.91
CCDC66A2RUB6 MIR1298-201ENST00000408783 112 ntBASIC3.09□□□□□ -1.91
CCDC66A2RUB6 AC080013.2-201ENST00000460866 323 ntBASIC3.09□□□□□ -1.91
CCDC66A2RUB6 AC018630.3-201ENST00000542637 96 ntBASIC3.09□□□□□ -1.91
CCDC66A2RUB6 MIR5004-201ENST00000579078 107 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms