Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.7□□□□□ -1.98
DNMT3BQ9UBC3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
DNMT3BQ9UBC3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
DNMT3BQ9UBC3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.7□□□□□ -1.98
DNMT3BQ9UBC3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.7□□□□□ -1.98
DNMT3BQ9UBC3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.7□□□□□ -1.98
DNMT3BQ9UBC3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 Y_RNA.26-201ENST00000362539 101 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 RNU1-62P-201ENST00000362599 164 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 SNORD32B-201ENST00000364460 84 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 Y_RNA.396-201ENST00000383949 103 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 Y_RNA.439-201ENST00000384119 94 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-793P-201ENST00000384233 104 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 Y_RNA.458-201ENST00000384240 102 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 MIR627-201ENST00000384979 97 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 MIR329-1-201ENST00000385028 80 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 MIR1294-201ENST00000408503 142 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 RNU2-63P-201ENST00000410792 194 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 RPEP5-201ENST00000441137 268 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 AL161788.1-201ENST00000441805 169 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 AC004386.2-201ENST00000441858 148 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 Z96811.1-201ENST00000445880 108 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 AC067942.3-201ENST00000512025 362 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 SNORA40.15-201ENST00000516884 107 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 MIR4659A-201ENST00000580269 81 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 MIR5006-201ENST00000583027 110 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 U4.3-201ENST00000621047 82 ntBASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.69□□□□□ -1.98
DNMT3BQ9UBC3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 Y_RNA.188-201ENST00000363952 111 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 Y_RNA.276-201ENST00000364732 109 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 Y_RNA.307-201ENST00000365022 117 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 SNORA18.2-201ENST00000383865 132 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 MIR518C-201ENST00000384822 101 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 MRPL35P1-201ENST00000404272 572 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 MIR1302-3-201ENST00000408128 138 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 AC010095.1-201ENST00000443543 144 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-1143P-201ENST00000516125 104 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 RNU2-44P-201ENST00000516795 194 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-388P-201ENST00000517012 105 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-389P-201ENST00000517048 105 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 AC004486.1-201ENST00000546846 233 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 RAC1P9-201ENST00000604990 392 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 AC240442.1-201ENST00000616055 283 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 AL449363.1-201ENST00000617815 186 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 Z82209.1-201ENST00000422141 2135 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 MTND5P35-201ENST00000557537 1720 ntBASIC2.68□□□□□ -1.98
DNMT3BQ9UBC3 ZNF658B-202ENST00000615961 3375 ntBASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-944P-201ENST00000364023 107 ntBASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 Y_RNA.222-201ENST00000364264 102 ntBASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-926P-201ENST00000384075 107 ntBASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-611P-201ENST00000384276 104 ntBASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-220P-201ENST00000390919 107 ntBASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 AC009237.7-201ENST00000447357 229 ntBASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 AC007395.1-201ENST00000451333 677 ntBASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 AC107222.1-201ENST00000510899 637 ntBASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-397P-201ENST00000516226 104 ntBASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-344P-201ENST00000516635 111 ntBASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.67□□□□□ -1.98
DNMT3BQ9UBC3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-379P-201ENST00000363813 104 ntBASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-806P-201ENST00000365147 105 ntBASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 RNU6-1109P-201ENST00000391187 107 ntBASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 Z98742.3-201ENST00000418637 326 ntBASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 AL445687.1-201ENST00000439946 251 ntBASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 DYNLT3P2-201ENST00000442517 295 ntBASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 IFNA11P-201ENST00000446352 526 ntBASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 AC091179.3-201ENST00000474761 144 ntBASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 RPS27AP9-201ENST00000477681 438 ntBASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 RPS23P5-201ENST00000495419 428 ntBASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.66□□□□□ -1.98
DNMT3BQ9UBC3 Y_RNA.680-201ENST00000516441 93 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms