Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 AC005000.2-201ENST00000605468 310 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 AC013412.1-201ENST00000610687 192 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.32□□□□□ -2.04
LIN7CQ9NUP9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 SNORD114-6-201ENST00000364393 72 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 RNU6-1160P-201ENST00000384546 104 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 RNU6-985P-201ENST00000410182 104 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 RNU6-57P-201ENST00000411348 103 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 RAB28P5-201ENST00000427490 651 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 RPEP5-201ENST00000441137 268 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 U8.20-201ENST00000459445 131 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 AC067942.3-201ENST00000512025 362 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 RNU6-764P-201ENST00000516396 105 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 AC087441.2-201ENST00000529141 262 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 AC113195.1-201ENST00000579952 141 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 ZNF861P-201ENST00000588126 639 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 AL021879.1-201ENST00000611756 288 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 PART1_1.1-201ENST00000611761 217 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 AC010205.1-201ENST00000616668 449 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 AC130454.1-201ENST00000622948 401 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 snoZ196.1-201ENST00000625269 89 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 AC092593.1-201ENST00000515413 1815 ntBASIC2.31□□□□□ -2.04
LIN7CQ9NUP9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 SNORA63C-201ENST00000364578 129 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 SNORA44-201ENST00000384584 132 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 RNU6-160P-201ENST00000384591 107 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 Y_RNA.551-201ENST00000384661 102 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 SNORA48.2-201ENST00000390926 124 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 AL079342.1-201ENST00000401460 267 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 MIR1185-2-201ENST00000408687 86 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 MIR1252-201ENST00000408861 65 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 Z92545.1-201ENST00000411782 234 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 AL357134.1-201ENST00000445848 426 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 SCARNA13-201ENST00000516672 275 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 AP002001.1-203ENST00000534002 267 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 AL109918.3-201ENST00000603072 338 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 Y_RNA.772-201ENST00000606692 102 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 AL590240.4-201ENST00000616908 390 ntBASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
LIN7CQ9NUP9 RNU6-626P-201ENST00000363354 107 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 SNORA63.7-201ENST00000365579 123 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 RNU6-1264P-201ENST00000383891 107 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 RNU6-20P-201ENST00000384106 107 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 Y_RNA.439-201ENST00000384119 94 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 RNU6-1235P-201ENST00000384559 107 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 MIR29C-201ENST00000385231 88 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 HMGN2P39-201ENST00000398005 273 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 RNA5SP475-201ENST00000410568 110 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 RNU6-130P-201ENST00000411112 103 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 BX510359.4-201ENST00000423750 193 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 AL139132.1-201ENST00000431587 344 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 RNU6-498P-201ENST00000459468 107 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 SRIP1-201ENST00000489235 288 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 RNU6-397P-201ENST00000516226 104 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 RNU1-104P-201ENST00000517280 175 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 AL355596.1-201ENST00000565399 3996 ntBASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.29□□□□□ -2.04
LIN7CQ9NUP9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 RNA5SP393-201ENST00000363423 117 ntBASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 Y_RNA.380-201ENST00000365663 111 ntBASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 TOMM22P2-201ENST00000430735 237 ntBASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 RPS29P26-201ENST00000477483 171 ntBASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 RNU2-34P-201ENST00000516534 121 ntBASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 RNU7-193P-201ENST00000516723 65 ntBASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 AC055872.1-201ENST00000570978 278 ntBASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 RAC1P9-201ENST00000604990 392 ntBASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 AC245884.12-201ENST00000615364 59 ntBASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 MIR3674-201ENST00000636576 68 ntBASIC2.28□□□□□ -2.04
LIN7CQ9NUP9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms