Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 MIR670-201ENST00000390142 98 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 SNORA75.5-201ENST00000391291 81 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 AL512604.1-201ENST00000404812 257 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 RNU6-588P-201ENST00000410281 105 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 RNU4-43P-201ENST00000410628 137 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 AL135786.1-201ENST00000415892 214 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 AC010154.1-201ENST00000425857 269 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 AC009414.1-201ENST00000427200 443 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 AL353705.1-201ENST00000433468 480 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 AC080013.2-201ENST00000460866 323 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 RN7SL542P-201ENST00000467147 294 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 RPL36AP21-201ENST00000490372 323 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 MRPS36P2-201ENST00000512569 299 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 RNU4-57P-201ENST00000515980 135 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 AL606490.9-201ENST00000603331 271 ntBASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
BHLHE41Q9C0J9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 SNORD45.3-201ENST00000363836 72 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-944P-201ENST00000364023 107 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 RNU4-41P-201ENST00000364426 143 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-1080P-201ENST00000383982 107 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 MIR181A2-201ENST00000384863 110 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 RNA5SP171-201ENST00000391071 115 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 PTMAP2-201ENST00000397627 327 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 AL035461.1-201ENST00000421490 332 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 U3.44-201ENST00000458938 192 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 RN7SL323P-201ENST00000494712 295 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 ATP5EP1-201ENST00000510257 156 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-919P-201ENST00000516731 104 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-586P-201ENST00000517265 104 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 AC090142.3-201ENST00000519012 385 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 CYCSP30-201ENST00000546447 172 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 MIR6875-201ENST00000617506 72 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 UCA1.1-201ENST00000620952 75 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 AL021368.2-201ENST00000606125 5352 ntBASIC3.52□□□□□ -1.85
BHLHE41Q9C0J9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 MIR423-201ENST00000362201 94 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-283P-201ENST00000364788 107 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 SNORD31B-201ENST00000364977 69 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-438P-201ENST00000365561 103 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 Y_RNA.587-201ENST00000391210 103 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 CYCSP19-201ENST00000411715 316 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 AC006989.1-201ENST00000427212 131 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 NDUFB1P1-201ENST00000435191 180 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 AC008155.2-201ENST00000464337 397 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 AC093663.1-201ENST00000497190 394 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 SCARNA17.1-201ENST00000516211 143 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 SCARNA17.2-201ENST00000516334 143 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 SCARNA14-201ENST00000516903 136 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 U7.2-201ENST00000607576 63 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 AC013412.1-201ENST00000610687 192 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 SCARNA17.4-201ENST00000614296 143 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 AC012640.5-201ENST00000623897 319 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 AC110774.1-201ENST00000623567 2018 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 AL353746.1-201ENST00000566293 6881 ntBASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BHLHE41Q9C0J9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 RNA5SP496-201ENST00000391240 109 ntBASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 RHEBP3-201ENST00000411920 351 ntBASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 AC008134.1-201ENST00000420943 193 ntBASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 AC002075.2-201ENST00000425207 252 ntBASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-948P-201ENST00000516374 107 ntBASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-63P-201ENST00000516690 95 ntBASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 MIR4474-201ENST00000579189 78 ntBASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 AC096577.2-201ENST00000611455 153 ntBASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 AP001340.1-201ENST00000624405 217 ntBASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms