Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU7-141P-201ENST00000459304 62 ntBASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 RPL23AP62-201ENST00000463396 453 ntBASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 RNA5SP272-201ENST00000516095 111 ntBASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 SNORA70.18-201ENST00000516696 98 ntBASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 RPL30P11-203ENST00000598995 310 ntBASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 AC025754.2-201ENST00000606491 432 ntBASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 AC091953.5-201ENST00000622919 233 ntBASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM56Q9BRZ2 SNORA63.1-201ENST00000362493 131 ntBASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 RNA5SP205-201ENST00000364653 136 ntBASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 MIR539-201ENST00000365690 78 ntBASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 MIR591-201ENST00000385290 95 ntBASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 RN7SKP156-201ENST00000410308 342 ntBASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 MICF-203ENST00000432679 129 ntBASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 MIR4724-201ENST00000579485 89 ntBASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 AC110079.1-202ENST00000635213 138 ntBASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM56Q9BRZ2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 MIR367-201ENST00000362299 68 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 SNORD114-7-201ENST00000362520 77 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 RNA5SP119-201ENST00000362715 117 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 RNU6-1305P-201ENST00000364353 104 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 Y_RNA.273-201ENST00000364703 102 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 SNORA73.2-201ENST00000364946 201 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 MIR548B-201ENST00000385247 97 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 SNORA48.5-201ENST00000391143 135 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 MTND4LP9-201ENST00000427694 174 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 AL121914.1-201ENST00000450188 156 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 AC245047.8-201ENST00000456455 284 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 U3.44-201ENST00000458938 192 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 AC026403.1-201ENST00000518938 295 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 AL359881.1-201ENST00000602916 267 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 RMST_8.1-201ENST00000610287 165 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 AC068700.1-201ENST00000565862 3754 ntBASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM56Q9BRZ2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 SNORD37.2-201ENST00000391075 66 ntBASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 AC006461.1-201ENST00000412637 326 ntBASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 AC093578.1-201ENST00000415219 368 ntBASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 AC009414.1-201ENST00000427200 443 ntBASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 AC006989.1-201ENST00000427212 131 ntBASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 RPL23AP83-201ENST00000434984 473 ntBASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 RPL23AP58-201ENST00000440453 469 ntBASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 MIR5187-201ENST00000583479 76 ntBASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 AC107294.3-201ENST00000609211 526 ntBASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 UCA1.1-201ENST00000620952 75 ntBASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 MIR3658-201ENST00000636291 56 ntBASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM56Q9BRZ2 AL355596.1-201ENST00000565399 3996 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 Y_RNA.127-201ENST00000363386 109 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 RNA5SP51-201ENST00000364750 119 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 RNU6-643P-201ENST00000384018 107 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 Y_RNA.572-201ENST00000384757 98 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 RNU6-1228P-201ENST00000391014 107 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 MIR300-201ENST00000401138 83 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 SCARNA8-201ENST00000515924 131 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 RNU6-453P-201ENST00000516819 85 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 RNU6-971P-201ENST00000516920 106 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 AC112693.2-201ENST00000556538 232 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 AC099778.2-201ENST00000610904 211 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 MIR7157-201ENST00000635801 60 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 AC058791.1-201ENST00000608412 3198 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 Z82209.1-201ENST00000422141 2135 ntBASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TRIM56Q9BRZ2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM56Q9BRZ2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM56Q9BRZ2 AC068647.1-201ENST00000489539 2265 ntBASIC3.6□□□□□ -1.83
TRIM56Q9BRZ2 Y_RNA.172-201ENST00000363765 102 ntBASIC3.6□□□□□ -1.83
TRIM56Q9BRZ2 RNU6-728P-201ENST00000365375 104 ntBASIC3.6□□□□□ -1.83
TRIM56Q9BRZ2 SNORD116-14-201ENST00000383894 92 ntBASIC3.6□□□□□ -1.83
TRIM56Q9BRZ2 SNORD116-17-201ENST00000383929 92 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms