Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MS4A4AQ96JQ5 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 AC002546.1-201ENST00000588041 2504 ntBASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 SNORD115-28-201ENST00000363931 81 ntBASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 RNU1-44P-201ENST00000384453 163 ntBASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 Y_RNA.531-201ENST00000384589 121 ntBASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 MIR1179-201ENST00000408703 91 ntBASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 MRPL35P3-201ENST00000421557 364 ntBASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 FTH1P12-201ENST00000432137 551 ntBASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 AP001486.1-201ENST00000463339 476 ntBASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 RNU6-857P-201ENST00000515893 110 ntBASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 SNORA31.21-201ENST00000517180 77 ntBASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 MIR4666B-201ENST00000578142 81 ntBASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MS4A4AQ96JQ5 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 SNORA60-201ENST00000362396 134 ntBASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 RNU6-170P-201ENST00000362832 104 ntBASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 Y_RNA.73-201ENST00000362910 113 ntBASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 RNU6-442P-201ENST00000383968 104 ntBASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 RNU6-644P-201ENST00000391155 98 ntBASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 RNU6-1186P-201ENST00000410429 97 ntBASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 RN7SKP167-201ENST00000411047 285 ntBASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 HMGN2P18-201ENST00000450680 270 ntBASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 RNA5SP57-201ENST00000459463 123 ntBASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 PPIAP15-201ENST00000479662 484 ntBASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 AC006441.5-201ENST00000612680 209 ntBASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
MS4A4AQ96JQ5 MAPK10-349ENST00000641767 3661 ntBASIC4.71□□□□□ -1.65
MS4A4AQ96JQ5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.71□□□□□ -1.65
MS4A4AQ96JQ5 AL672167.1-203ENST00000641299 2975 ntBASIC4.71□□□□□ -1.65
MS4A4AQ96JQ5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
MS4A4AQ96JQ5 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
MS4A4AQ96JQ5 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
MS4A4AQ96JQ5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
MS4A4AQ96JQ5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 Y_RNA.155-201ENST00000363632 101 ntBASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-979P-201ENST00000383896 107 ntBASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 SNORA18-201ENST00000384416 132 ntBASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 MIR183-201ENST00000384958 110 ntBASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-733P-201ENST00000410759 104 ntBASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 HMGN2P34-201ENST00000437647 269 ntBASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 S100A11P1-201ENST00000477525 312 ntBASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-1291P-201ENST00000516591 104 ntBASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-341P-201ENST00000516973 96 ntBASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 MIR5588-201ENST00000581890 63 ntBASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 U2.20-201ENST00000613956 192 ntBASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 AC073346.2-201ENST00000624724 2058 ntBASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
MS4A4AQ96JQ5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-661P-201ENST00000362409 107 ntBASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 Y_RNA.37-201ENST00000362606 108 ntBASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-832P-201ENST00000363319 107 ntBASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 RNU2-11P-201ENST00000459191 187 ntBASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 RNU7-171P-201ENST00000459581 62 ntBASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 AC113410.1-201ENST00000505029 247 ntBASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-856P-201ENST00000516959 98 ntBASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 YPEL5P3-201ENST00000547227 352 ntBASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 AC091544.4-201ENST00000555268 342 ntBASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 AC087499.8-201ENST00000578406 226 ntBASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms