Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 AC009414.1-201ENST00000427200 443 ntBASIC4.09□□□□□ -1.75
NR1H3Q13133 AC080013.2-201ENST00000460866 323 ntBASIC4.09□□□□□ -1.75
NR1H3Q13133 ATP5EP1-201ENST00000510257 156 ntBASIC4.09□□□□□ -1.75
NR1H3Q13133 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.09□□□□□ -1.75
NR1H3Q13133 MIR3944-201ENST00000581277 108 ntBASIC4.09□□□□□ -1.75
NR1H3Q13133 AC096577.2-201ENST00000611455 153 ntBASIC4.09□□□□□ -1.75
NR1H3Q13133 AL591424.2-201ENST00000617023 128 ntBASIC4.09□□□□□ -1.75
NR1H3Q13133 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
NR1H3Q13133 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NR1H3Q13133 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NR1H3Q13133 Y_RNA.432-201ENST00000384087 111 ntBASIC4.08□□□□□ -1.76
NR1H3Q13133 AC008134.1-201ENST00000420943 193 ntBASIC4.08□□□□□ -1.76
NR1H3Q13133 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.08□□□□□ -1.76
NR1H3Q13133 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.08□□□□□ -1.76
NR1H3Q13133 RNU7-107P-201ENST00000459121 61 ntBASIC4.08□□□□□ -1.76
NR1H3Q13133 RNA5SP76-201ENST00000516277 87 ntBASIC4.08□□□□□ -1.76
NR1H3Q13133 RNU6-197P-201ENST00000516680 100 ntBASIC4.08□□□□□ -1.76
NR1H3Q13133 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.08□□□□□ -1.76
NR1H3Q13133 Y_RNA.757-201ENST00000578934 114 ntBASIC4.08□□□□□ -1.76
NR1H3Q13133 AC006435.5-201ENST00000624486 112 ntBASIC4.08□□□□□ -1.76
NR1H3Q13133 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NR1H3Q13133 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NR1H3Q13133 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.07□□□□□ -1.76
NR1H3Q13133 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NR1H3Q13133 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NR1H3Q13133 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.07□□□□□ -1.76
NR1H3Q13133 RNU6-438P-201ENST00000365561 103 ntBASIC4.07□□□□□ -1.76
NR1H3Q13133 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NR1H3Q13133 RNU6-1064P-201ENST00000410626 104 ntBASIC4.07□□□□□ -1.76
NR1H3Q13133 RNU2-55P-201ENST00000411146 174 ntBASIC4.07□□□□□ -1.76
NR1H3Q13133 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NR1H3Q13133 MRPS36P2-201ENST00000512569 299 ntBASIC4.07□□□□□ -1.76
NR1H3Q13133 RNU6-586P-201ENST00000517265 104 ntBASIC4.07□□□□□ -1.76
NR1H3Q13133 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.07□□□□□ -1.76
NR1H3Q13133 SNORA51-201ENST00000606420 132 ntBASIC4.07□□□□□ -1.76
NR1H3Q13133 AC013412.1-201ENST00000610687 192 ntBASIC4.07□□□□□ -1.76
NR1H3Q13133 AC012442.3-202ENST00000636742 206 ntBASIC4.07□□□□□ -1.76
NR1H3Q13133 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NR1H3Q13133 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NR1H3Q13133 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NR1H3Q13133 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NR1H3Q13133 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
NR1H3Q13133 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NR1H3Q13133 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.06□□□□□ -1.76
NR1H3Q13133 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NR1H3Q13133 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
NR1H3Q13133 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.06□□□□□ -1.76
NR1H3Q13133 MIR423-201ENST00000362201 94 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 SNORA25.7-201ENST00000364375 127 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 MIR7-3-201ENST00000384898 110 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 RNA5SP511-201ENST00000410487 115 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 RHEBP3-201ENST00000411920 351 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.06□□□□□ -1.76
NR1H3Q13133 AL139247.1-201ENST00000422768 325 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.06□□□□□ -1.76
NR1H3Q13133 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.06□□□□□ -1.76
NR1H3Q13133 SCARNA17.1-201ENST00000516211 143 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 RNU6-1299P-201ENST00000516316 100 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 SCARNA17.2-201ENST00000516334 143 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 RNU6-711P-201ENST00000517255 106 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 AC025647.1-201ENST00000517879 253 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 AL049861.1-201ENST00000603130 150 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 AC093732.2-201ENST00000607950 274 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 SCARNA17.4-201ENST00000614296 143 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 AL121772.2-201ENST00000614331 297 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 uc_338.32-201ENST00000615087 172 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 UCA1.1-201ENST00000620952 75 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.06□□□□□ -1.76
NR1H3Q13133 AC009487.4-201ENST00000624969 3585 ntBASIC4.06□□□□□ -1.76
NR1H3Q13133 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.05□□□□□ -1.76
NR1H3Q13133 RNU6-418P-201ENST00000384035 107 ntBASIC4.05□□□□□ -1.76
NR1H3Q13133 RNU6-1235P-201ENST00000384559 107 ntBASIC4.05□□□□□ -1.76
NR1H3Q13133 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.05□□□□□ -1.76
NR1H3Q13133 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.05□□□□□ -1.76
NR1H3Q13133 RNU6-498P-201ENST00000459468 107 ntBASIC4.05□□□□□ -1.76
NR1H3Q13133 AC010531.2-201ENST00000465012 153 ntBASIC4.05□□□□□ -1.76
NR1H3Q13133 RPS27P22-201ENST00000478056 241 ntBASIC4.05□□□□□ -1.76
NR1H3Q13133 AC093663.1-201ENST00000497190 394 ntBASIC4.05□□□□□ -1.76
NR1H3Q13133 AC107934.2-201ENST00000518653 310 ntBASIC4.05□□□□□ -1.76
NR1H3Q13133 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
NR1H3Q13133 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NR1H3Q13133 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NR1H3Q13133 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NR1H3Q13133 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NR1H3Q13133 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NR1H3Q13133 RNA5SP399-201ENST00000364003 117 ntBASIC4.04□□□□□ -1.76
NR1H3Q13133 SNORA14A-201ENST00000364773 135 ntBASIC4.04□□□□□ -1.76
NR1H3Q13133 SNORA72-201ENST00000384339 132 ntBASIC4.04□□□□□ -1.76
NR1H3Q13133 MIR23A-201ENST00000385245 73 ntBASIC4.04□□□□□ -1.76
NR1H3Q13133 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NR1H3Q13133 AC016925.1-201ENST00000458303 298 ntBASIC4.04□□□□□ -1.76
NR1H3Q13133 U3.44-201ENST00000458938 192 ntBASIC4.04□□□□□ -1.76
NR1H3Q13133 RNA5SP164-201ENST00000516533 110 ntBASIC4.04□□□□□ -1.76
NR1H3Q13133 YPEL5P3-201ENST00000547227 352 ntBASIC4.04□□□□□ -1.76
NR1H3Q13133 AC015720.1-201ENST00000565251 277 ntBASIC4.04□□□□□ -1.76
NR1H3Q13133 AL021707.8-201ENST00000609428 183 ntBASIC4.04□□□□□ -1.76
NR1H3Q13133 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NR1H3Q13133 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.03□□□□□ -1.76
NR1H3Q13133 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.03□□□□□ -1.76
NR1H3Q13133 AC093908.1-201ENST00000623125 8092 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms