Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC091544.4-201ENST00000555268 342 ntBASIC2.67□□□□□ -1.98
COPAP53621 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.67□□□□□ -1.98
COPAP53621 AL355297.3-201ENST00000604082 446 ntBASIC2.67□□□□□ -1.98
COPAP53621 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.67□□□□□ -1.98
COPAP53621 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
COPAP53621 RNU6-281P-201ENST00000384212 103 ntBASIC2.66□□□□□ -1.98
COPAP53621 Y_RNA.471-201ENST00000384312 102 ntBASIC2.66□□□□□ -1.98
COPAP53621 Y_RNA.551-201ENST00000384661 102 ntBASIC2.66□□□□□ -1.98
COPAP53621 RNA5SP213-201ENST00000391031 106 ntBASIC2.66□□□□□ -1.98
COPAP53621 RN7SKP284-201ENST00000411002 343 ntBASIC2.66□□□□□ -1.98
COPAP53621 AC009963.1-201ENST00000417265 157 ntBASIC2.66□□□□□ -1.98
COPAP53621 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.66□□□□□ -1.98
COPAP53621 AC004386.2-201ENST00000441858 148 ntBASIC2.66□□□□□ -1.98
COPAP53621 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.66□□□□□ -1.98
COPAP53621 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.66□□□□□ -1.98
COPAP53621 HMGN1P10-201ENST00000474557 553 ntBASIC2.66□□□□□ -1.98
COPAP53621 AC018630.3-201ENST00000542637 96 ntBASIC2.66□□□□□ -1.98
COPAP53621 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.66□□□□□ -1.98
COPAP53621 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.66□□□□□ -1.98
COPAP53621 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.66□□□□□ -1.98
COPAP53621 MIR5006-201ENST00000583027 110 ntBASIC2.66□□□□□ -1.98
COPAP53621 AC125232.2-201ENST00000592457 143 ntBASIC2.66□□□□□ -1.98
COPAP53621 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.66□□□□□ -1.98
COPAP53621 TCL6_2.1-201ENST00000615162 119 ntBASIC2.66□□□□□ -1.98
COPAP53621 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
COPAP53621 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
COPAP53621 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.65□□□□□ -1.99
COPAP53621 Y_RNA.153-201ENST00000363615 91 ntBASIC2.65□□□□□ -1.99
COPAP53621 RNU6-1001P-201ENST00000411265 100 ntBASIC2.65□□□□□ -1.99
COPAP53621 SDAD1P3-201ENST00000427380 333 ntBASIC2.65□□□□□ -1.99
COPAP53621 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.65□□□□□ -1.99
COPAP53621 U8.20-201ENST00000459445 131 ntBASIC2.65□□□□□ -1.99
COPAP53621 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.65□□□□□ -1.99
COPAP53621 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.65□□□□□ -1.99
COPAP53621 RNU5F-4P-201ENST00000516581 114 ntBASIC2.65□□□□□ -1.99
COPAP53621 RNU2-44P-201ENST00000516795 194 ntBASIC2.65□□□□□ -1.99
COPAP53621 AC034114.1-201ENST00000520293 285 ntBASIC2.65□□□□□ -1.99
COPAP53621 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.65□□□□□ -1.99
COPAP53621 AC131281.1-201ENST00000522984 164 ntBASIC2.65□□□□□ -1.99
COPAP53621 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.65□□□□□ -1.99
COPAP53621 AC022616.8-201ENST00000533569 253 ntBASIC2.65□□□□□ -1.99
COPAP53621 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.65□□□□□ -1.99
COPAP53621 RPL17P51-201ENST00000605218 238 ntBASIC2.65□□□□□ -1.99
COPAP53621 AL121655.1-201ENST00000605811 308 ntBASIC2.65□□□□□ -1.99
COPAP53621 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.65□□□□□ -1.99
COPAP53621 AL021879.1-201ENST00000611756 288 ntBASIC2.65□□□□□ -1.99
COPAP53621 AC010999.1-201ENST00000611856 324 ntBASIC2.65□□□□□ -1.99
COPAP53621 U6.92-201ENST00000636464 89 ntBASIC2.65□□□□□ -1.99
COPAP53621 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
COPAP53621 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
COPAP53621 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.64□□□□□ -1.99
COPAP53621 MIR6073-201ENST00000352083 89 ntBASIC2.64□□□□□ -1.99
COPAP53621 RNA5SP361-201ENST00000362686 118 ntBASIC2.64□□□□□ -1.99
COPAP53621 RNU6-1309P-201ENST00000363305 108 ntBASIC2.64□□□□□ -1.99
COPAP53621 Y_RNA.179-201ENST00000363844 90 ntBASIC2.64□□□□□ -1.99
COPAP53621 RNU6-318P-201ENST00000384283 103 ntBASIC2.64□□□□□ -1.99
COPAP53621 OOSP1P1-201ENST00000423265 274 ntBASIC2.64□□□□□ -1.99
COPAP53621 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.64□□□□□ -1.99
COPAP53621 MTATP8P1-201ENST00000467115 207 ntBASIC2.64□□□□□ -1.99
COPAP53621 RPS23P5-201ENST00000495419 428 ntBASIC2.64□□□□□ -1.99
COPAP53621 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.64□□□□□ -1.99
COPAP53621 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.64□□□□□ -1.99
COPAP53621 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.64□□□□□ -1.99
COPAP53621 RN7SKP49-201ENST00000516675 260 ntBASIC2.64□□□□□ -1.99
COPAP53621 Y_RNA.713-201ENST00000517013 96 ntBASIC2.64□□□□□ -1.99
COPAP53621 DEFB131C-201ENST00000528817 165 ntBASIC2.64□□□□□ -1.99
COPAP53621 AL117187.1-201ENST00000555482 181 ntBASIC2.64□□□□□ -1.99
COPAP53621 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.64□□□□□ -1.99
COPAP53621 U4atac.1-201ENST00000618345 95 ntBASIC2.64□□□□□ -1.99
COPAP53621 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.64□□□□□ -1.99
COPAP53621 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.64□□□□□ -1.99
COPAP53621 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.64□□□□□ -1.99
COPAP53621 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COPAP53621 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COPAP53621 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.63□□□□□ -1.99
COPAP53621 RNU6-743P-201ENST00000364151 106 ntBASIC2.63□□□□□ -1.99
COPAP53621 Y_RNA.210-201ENST00000364161 110 ntBASIC2.63□□□□□ -1.99
COPAP53621 RNU6-793P-201ENST00000384233 104 ntBASIC2.63□□□□□ -1.99
COPAP53621 RNU6-1105P-201ENST00000384774 107 ntBASIC2.63□□□□□ -1.99
COPAP53621 SNORD12B-201ENST00000410433 91 ntBASIC2.63□□□□□ -1.99
COPAP53621 RNA5SP508-201ENST00000411327 119 ntBASIC2.63□□□□□ -1.99
COPAP53621 AL358176.2-201ENST00000425769 204 ntBASIC2.63□□□□□ -1.99
COPAP53621 MTND3P2-201ENST00000438452 342 ntBASIC2.63□□□□□ -1.99
COPAP53621 IFNA11P-201ENST00000446352 526 ntBASIC2.63□□□□□ -1.99
COPAP53621 FCF1P4-201ENST00000448326 183 ntBASIC2.63□□□□□ -1.99
COPAP53621 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.63□□□□□ -1.99
COPAP53621 SRIP1-201ENST00000489235 288 ntBASIC2.63□□□□□ -1.99
COPAP53621 AC010469.2-201ENST00000496412 480 ntBASIC2.63□□□□□ -1.99
COPAP53621 MRPS35P2-201ENST00000508242 191 ntBASIC2.63□□□□□ -1.99
COPAP53621 Y_RNA.683-201ENST00000516508 93 ntBASIC2.63□□□□□ -1.99
COPAP53621 RNU6-1098P-201ENST00000516772 96 ntBASIC2.63□□□□□ -1.99
COPAP53621 AC008269.2-201ENST00000561915 1105 ntBASIC2.63□□□□□ -1.99
COPAP53621 MYL12BP1-201ENST00000569826 507 ntBASIC2.63□□□□□ -1.99
COPAP53621 MIR4635-201ENST00000583759 79 ntBASIC2.63□□□□□ -1.99
COPAP53621 SNORD14A-201ENST00000606526 91 ntBASIC2.63□□□□□ -1.99
COPAP53621 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
COPAP53621 RNU1-62P-201ENST00000362599 164 ntBASIC2.62□□□□□ -1.99
COPAP53621 RNU6-234P-201ENST00000365229 104 ntBASIC2.62□□□□□ -1.99
COPAP53621 SNORA6-201ENST00000384033 151 ntBASIC2.62□□□□□ -1.99
COPAP53621 RNU6-926P-201ENST00000384075 107 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms