Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC245166.1-201ENST00000521012 253 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 MIR3121-201ENST00000579680 77 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 AC107294.3-201ENST00000609211 526 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 MIR378J-201ENST00000611988 109 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 AL138880.2-201ENST00000616214 239 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 AC068647.2-201ENST00000637380 353 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 MIR3529-201ENST00000637713 78 ntBASIC3.25□□□□□ -1.89
TRIM13O60858 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM13O60858 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TRIM13O60858 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM13O60858 ADAM3A-203ENST00000461344 2157 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM13O60858 RNU6-728P-201ENST00000365375 104 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TRIM13O60858 Y_RNA.415-201ENST00000384012 112 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 SNORA18.3-201ENST00000384122 132 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 SNORD17-201ENST00000390930 237 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 RNU4-43P-201ENST00000410628 137 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM13O60858 MTCO1P44-201ENST00000441935 243 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM13O60858 RBMY2UP-201ENST00000453474 324 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 PHBP14-201ENST00000512887 367 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 SNORA31.16-201ENST00000516773 139 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 IGKV2-26-201ENST00000518305 343 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM13O60858 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM13O60858 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM13O60858 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM13O60858 Y_RNA.757-201ENST00000578934 114 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 AL670379.3-201ENST00000605040 251 ntBASIC3.24□□□□□ -1.89
TRIM13O60858 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM13O60858 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM13O60858 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM13O60858 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM13O60858 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.23□□□□□ -1.89
TRIM13O60858 RNU1-70P-201ENST00000362618 164 ntBASIC3.23□□□□□ -1.89
TRIM13O60858 RNU6-1205P-201ENST00000363625 106 ntBASIC3.23□□□□□ -1.89
TRIM13O60858 RNU6-1280P-201ENST00000365211 107 ntBASIC3.23□□□□□ -1.89
TRIM13O60858 Y_RNA.625-201ENST00000411256 107 ntBASIC3.23□□□□□ -1.89
TRIM13O60858 AL714022.1-201ENST00000439897 151 ntBASIC3.23□□□□□ -1.89
TRIM13O60858 snoU13.28-201ENST00000459235 104 ntBASIC3.23□□□□□ -1.89
TRIM13O60858 Y_RNA.651-201ENST00000459380 103 ntBASIC3.23□□□□□ -1.89
TRIM13O60858 AC025518.1-201ENST00000479856 347 ntBASIC3.23□□□□□ -1.89
TRIM13O60858 AC021739.1-201ENST00000559631 174 ntBASIC3.23□□□□□ -1.89
TRIM13O60858 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.23□□□□□ -1.89
TRIM13O60858 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TRIM13O60858 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM13O60858 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM13O60858 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM13O60858 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.23□□□□□ -1.89
TRIM13O60858 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM13O60858 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM13O60858 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM13O60858 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM13O60858 RNA5SP119-201ENST00000362715 117 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 U3.9-201ENST00000363823 204 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 RNU6-1082P-201ENST00000364574 107 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 Y_RNA.310-201ENST00000365063 113 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 RNU6-597P-201ENST00000365620 102 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 Y_RNA.456-201ENST00000384232 111 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 Y_RNA.495-201ENST00000384435 112 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM13O60858 RN7SKP284-201ENST00000411002 343 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM13O60858 AC019205.3-201ENST00000424573 156 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 AC004975.1-201ENST00000428733 208 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM13O60858 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM13O60858 RPL39P29-201ENST00000447779 157 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 RNU7-141P-201ENST00000459304 62 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 RPL31P41-201ENST00000477967 372 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM13O60858 AC006199.1-201ENST00000548728 219 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM13O60858 snoZ196.1-201ENST00000625269 89 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 MIR3199-2-201ENST00000636243 86 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM13O60858 AL136164.4-201ENST00000625013 2135 ntBASIC3.22□□□□□ -1.89
TRIM13O60858 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM13O60858 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
TRIM13O60858 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM13O60858 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM13O60858 RNU4-35P-201ENST00000362588 141 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 Y_RNA.35-201ENST00000362601 101 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 Y_RNA.243-201ENST00000364481 109 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 RNU6-32P-201ENST00000383948 107 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 RNU6-13P-201ENST00000384248 107 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 SNORD116-21-201ENST00000384507 92 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 RNU6-12P-201ENST00000384604 107 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 RNU6-41P-201ENST00000384741 107 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 Y_RNA.584-201ENST00000391090 114 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 RPL21P3-201ENST00000395517 478 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 MIR320B2-201ENST00000408479 138 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 RNU6-855P-201ENST00000410395 104 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 RNA5SP229-201ENST00000410809 99 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 AC090525.1-201ENST00000479116 478 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 AC104619.4-201ENST00000510773 249 ntBASIC3.21□□□□□ -1.9
TRIM13O60858 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM13O60858 RNU6-107P-201ENST00000516643 102 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms