Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 RNA5SP68-201ENST00000363885 119 ntBASIC2.63□□□□□ -1.99
TSPAN6O43657 RNY3P4-201ENST00000384428 101 ntBASIC2.63□□□□□ -1.99
TSPAN6O43657 Y_RNA.526-201ENST00000384572 110 ntBASIC2.63□□□□□ -1.99
TSPAN6O43657 RNU6-57P-201ENST00000411348 103 ntBASIC2.63□□□□□ -1.99
TSPAN6O43657 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.63□□□□□ -1.99
TSPAN6O43657 AC018865.2-201ENST00000423631 129 ntBASIC2.63□□□□□ -1.99
TSPAN6O43657 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.63□□□□□ -1.99
TSPAN6O43657 MIR4635-201ENST00000583759 79 ntBASIC2.63□□□□□ -1.99
TSPAN6O43657 AC005786.1-201ENST00000588553 154 ntBASIC2.63□□□□□ -1.99
TSPAN6O43657 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
TSPAN6O43657 MIR6817-201ENST00000615588 66 ntBASIC2.63□□□□□ -1.99
TSPAN6O43657 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.63□□□□□ -1.99
TSPAN6O43657 AC008555.8-201ENST00000623602 2168 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TSPAN6O43657 MIR340-201ENST00000362125 95 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 RNU6-1266P-201ENST00000362794 105 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 RNY3P11-201ENST00000364153 102 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 SNORD114-6-201ENST00000364393 72 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 SNORA6-201ENST00000384033 151 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
TSPAN6O43657 SNORD12B-201ENST00000410433 91 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.62□□□□□ -1.99
TSPAN6O43657 AL353689.1-201ENST00000438895 199 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 AL137792.2-201ENST00000443484 235 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.62□□□□□ -1.99
TSPAN6O43657 RNU6-1146P-201ENST00000516282 102 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 MIR3169-201ENST00000578032 83 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.62□□□□□ -1.99
TSPAN6O43657 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.62□□□□□ -1.99
TSPAN6O43657 uc_338.22-201ENST00000622722 187 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 AC010297.1-201ENST00000623948 149 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 MIR4272-201ENST00000635924 64 ntBASIC2.62□□□□□ -1.99
TSPAN6O43657 Y_RNA.27-201ENST00000362540 103 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 RNU6-1264P-201ENST00000383891 107 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 RNU6-318P-201ENST00000384283 103 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 Y_RNA.498-201ENST00000384460 102 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 MIR548B-201ENST00000385247 97 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 SNORD78.2-201ENST00000391076 69 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 MIR1283-2-201ENST00000408621 87 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 SNORD88.1-201ENST00000408684 91 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 RNA5SP450-201ENST00000411206 102 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 HMGN2P3-201ENST00000433603 273 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 HMGN2P5-201ENST00000436882 273 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 FCF1P4-201ENST00000448326 183 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 AC016717.1-201ENST00000448918 286 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 ATP5J2P3-201ENST00000451550 258 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.61□□□□□ -1.99
TSPAN6O43657 AC006157.1-201ENST00000611750 366 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 AC138305.3-201ENST00000624988 240 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 AL606534.2-204ENST00000635008 178 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.61□□□□□ -1.99
TSPAN6O43657 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
TSPAN6O43657 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
TSPAN6O43657 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.6□□□□□ -1.99
TSPAN6O43657 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
TSPAN6O43657 Y_RNA.128-201ENST00000363391 112 ntBASIC2.6□□□□□ -1.99
TSPAN6O43657 Y_RNA.496-201ENST00000384444 101 ntBASIC2.6□□□□□ -1.99
TSPAN6O43657 SNORA11.4-201ENST00000408823 129 ntBASIC2.6□□□□□ -1.99
TSPAN6O43657 MTCO2P12-201ENST00000427426 682 ntBASIC2.6□□□□□ -1.99
TSPAN6O43657 RPL39P40-201ENST00000445481 146 ntBASIC2.6□□□□□ -1.99
TSPAN6O43657 RNU6-221P-201ENST00000459541 99 ntBASIC2.6□□□□□ -1.99
TSPAN6O43657 Y_RNA.631-201ENST00000459607 101 ntBASIC2.6□□□□□ -1.99
TSPAN6O43657 SNORA40.9-201ENST00000515895 93 ntBASIC2.6□□□□□ -1.99
TSPAN6O43657 SNORA40.14-201ENST00000516543 86 ntBASIC2.6□□□□□ -1.99
TSPAN6O43657 GNAI2P1-201ENST00000541815 315 ntBASIC2.6□□□□□ -1.99
TSPAN6O43657 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TSPAN6O43657 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
TSPAN6O43657 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 Y_RNA.813-201ENST00000364639 102 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 MIR597-201ENST00000384968 97 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 MIR1253-201ENST00000408273 105 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 MIR1185-2-201ENST00000408687 86 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 AC096644.2-201ENST00000429278 159 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 AL160004.2-201ENST00000432935 350 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 RNU6-625P-201ENST00000459412 107 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 RNU6-475P-201ENST00000516073 104 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 RNA5SP148-201ENST00000516527 94 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 SNORA31.15-201ENST00000516771 132 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 AC018448.1-201ENST00000552843 316 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 HSBP1P1-201ENST00000555205 166 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 MIR3684-201ENST00000579779 74 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 RPS29P30-201ENST00000600975 111 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.59□□□□□ -1.99
TSPAN6O43657 AC134503.1-201ENST00000633048 54 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 IGHVIII-44-202ENST00000636235 289 ntBASIC2.59□□□□□ -1.99
TSPAN6O43657 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.59□□□□□ -1.99
TSPAN6O43657 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
TSPAN6O43657 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
TSPAN6O43657 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
TSPAN6O43657 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TSPAN6O43657 RNU4-82P-201ENST00000362443 140 ntBASIC2.58□□□□□ -2
TSPAN6O43657 RNU6-1310P-201ENST00000384153 107 ntBASIC2.58□□□□□ -2
TSPAN6O43657 MIR27B-201ENST00000385129 97 ntBASIC2.58□□□□□ -2
TSPAN6O43657 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.58□□□□□ -2
TSPAN6O43657 IPO7P1-201ENST00000442031 636 ntBASIC2.58□□□□□ -2
TSPAN6O43657 AL513328.1-201ENST00000446460 224 ntBASIC2.58□□□□□ -2
TSPAN6O43657 GSTA11P-201ENST00000452866 669 ntBASIC2.58□□□□□ -2
TSPAN6O43657 RN7SL297P-201ENST00000483161 293 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms