Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC025554.1-201ENST00000505641 188 ntBASIC3.7□□□□□ -1.82
SOX1O00570 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.7□□□□□ -1.82
SOX1O00570 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX1O00570 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.7□□□□□ -1.82
SOX1O00570 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX1O00570 AC015813.4-201ENST00000610469 179 ntBASIC3.7□□□□□ -1.82
SOX1O00570 AC099778.2-201ENST00000610904 211 ntBASIC3.7□□□□□ -1.82
SOX1O00570 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX1O00570 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SOX1O00570 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SOX1O00570 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SOX1O00570 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX1O00570 AL356274.2-201ENST00000624379 3752 ntBASIC3.69□□□□□ -1.82
SOX1O00570 AC002546.1-201ENST00000588041 2504 ntBASIC3.69□□□□□ -1.82
SOX1O00570 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SOX1O00570 MIR448-201ENST00000362131 111 ntBASIC3.69□□□□□ -1.82
SOX1O00570 SNORD114-7-201ENST00000362520 77 ntBASIC3.69□□□□□ -1.82
SOX1O00570 Y_RNA.229-201ENST00000364347 113 ntBASIC3.69□□□□□ -1.82
SOX1O00570 RNU6-728P-201ENST00000365375 104 ntBASIC3.69□□□□□ -1.82
SOX1O00570 MIR15B-201ENST00000385045 98 ntBASIC3.69□□□□□ -1.82
SOX1O00570 MT-TT-201ENST00000387460 66 ntBASIC3.69□□□□□ -1.82
SOX1O00570 AL606845.1-201ENST00000404881 255 ntBASIC3.69□□□□□ -1.82
SOX1O00570 RNU2-37P-201ENST00000410695 177 ntBASIC3.69□□□□□ -1.82
SOX1O00570 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX1O00570 AC108938.1-201ENST00000451204 136 ntBASIC3.69□□□□□ -1.82
SOX1O00570 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX1O00570 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.69□□□□□ -1.82
SOX1O00570 RNU4-57P-201ENST00000515980 135 ntBASIC3.69□□□□□ -1.82
SOX1O00570 AP000867.2-201ENST00000532468 320 ntBASIC3.69□□□□□ -1.82
SOX1O00570 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX1O00570 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX1O00570 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.69□□□□□ -1.82
SOX1O00570 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SOX1O00570 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.69□□□□□ -1.82
SOX1O00570 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SOX1O00570 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.68□□□□□ -1.82
SOX1O00570 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.68□□□□□ -1.82
SOX1O00570 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.68□□□□□ -1.82
SOX1O00570 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.68□□□□□ -1.82
SOX1O00570 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SOX1O00570 AC010680.1-201ENST00000590024 3590 ntBASIC3.68□□□□□ -1.82
SOX1O00570 RNU6-834P-201ENST00000362367 110 ntBASIC3.68□□□□□ -1.82
SOX1O00570 RNU6-1325P-201ENST00000364905 105 ntBASIC3.68□□□□□ -1.82
SOX1O00570 RNU6-407P-201ENST00000365280 104 ntBASIC3.68□□□□□ -1.82
SOX1O00570 MIR504-201ENST00000385065 83 ntBASIC3.68□□□□□ -1.82
SOX1O00570 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SOX1O00570 Y_RNA.686-201ENST00000516548 134 ntBASIC3.68□□□□□ -1.82
SOX1O00570 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SOX1O00570 MIR6844-201ENST00000637122 62 ntBASIC3.68□□□□□ -1.82
SOX1O00570 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.68□□□□□ -1.82
SOX1O00570 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SOX1O00570 LINC02471-203ENST00000641941 4752 ntBASIC3.68□□□□□ -1.82
SOX1O00570 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SOX1O00570 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
SOX1O00570 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SOX1O00570 AL513302.2-201ENST00000562313 1842 ntBASIC3.67□□□□□ -1.82
SOX1O00570 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.67□□□□□ -1.82
SOX1O00570 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SOX1O00570 AL136164.4-201ENST00000625013 2135 ntBASIC3.67□□□□□ -1.82
SOX1O00570 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SOX1O00570 MIR367-201ENST00000362299 68 ntBASIC3.67□□□□□ -1.82
SOX1O00570 snoU2_19.1-201ENST00000362361 80 ntBASIC3.67□□□□□ -1.82
SOX1O00570 SNORD74.4-201ENST00000364129 80 ntBASIC3.67□□□□□ -1.82
SOX1O00570 RNU6-1305P-201ENST00000364353 104 ntBASIC3.67□□□□□ -1.82
SOX1O00570 MIR586-201ENST00000385035 97 ntBASIC3.67□□□□□ -1.82
SOX1O00570 RNA5SP508-201ENST00000411327 119 ntBASIC3.67□□□□□ -1.82
SOX1O00570 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.67□□□□□ -1.82
SOX1O00570 HSPE1P21-201ENST00000438283 308 ntBASIC3.67□□□□□ -1.82
SOX1O00570 AC112771.1-201ENST00000463581 102 ntBASIC3.67□□□□□ -1.82
SOX1O00570 FCF1P8-201ENST00000510322 597 ntBASIC3.67□□□□□ -1.82
SOX1O00570 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.67□□□□□ -1.82
SOX1O00570 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.67□□□□□ -1.82
SOX1O00570 MIR4319-201ENST00000577285 85 ntBASIC3.67□□□□□ -1.82
SOX1O00570 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.67□□□□□ -1.82
SOX1O00570 AC011603.4-201ENST00000611325 277 ntBASIC3.67□□□□□ -1.82
SOX1O00570 AP001340.1-201ENST00000624405 217 ntBASIC3.67□□□□□ -1.82
SOX1O00570 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SOX1O00570 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.67□□□□□ -1.82
SOX1O00570 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SOX1O00570 RNU1-18P-201ENST00000363062 164 ntBASIC3.66□□□□□ -1.82
SOX1O00570 U8.7-201ENST00000364940 136 ntBASIC3.66□□□□□ -1.82
SOX1O00570 MIR93-201ENST00000385024 80 ntBASIC3.66□□□□□ -1.82
SOX1O00570 MIR1185-2-201ENST00000408687 86 ntBASIC3.66□□□□□ -1.82
SOX1O00570 SNRPGP5-201ENST00000456003 220 ntBASIC3.66□□□□□ -1.82
SOX1O00570 RPS4XP2-201ENST00000458402 793 ntBASIC3.66□□□□□ -1.82
SOX1O00570 AC092991.1-201ENST00000477176 376 ntBASIC3.66□□□□□ -1.82
SOX1O00570 RPL36AP48-201ENST00000485521 314 ntBASIC3.66□□□□□ -1.82
SOX1O00570 RNU6-561P-201ENST00000516222 102 ntBASIC3.66□□□□□ -1.82
SOX1O00570 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.66□□□□□ -1.82
SOX1O00570 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.66□□□□□ -1.82
SOX1O00570 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.66□□□□□ -1.82
SOX1O00570 AC079598.5-201ENST00000547460 117 ntBASIC3.66□□□□□ -1.82
SOX1O00570 uc_338.14-201ENST00000613162 166 ntBASIC3.66□□□□□ -1.82
SOX1O00570 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
SOX1O00570 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SOX1O00570 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.65□□□□□ -1.82
SOX1O00570 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.65□□□□□ -1.82
SOX1O00570 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.65□□□□□ -1.82
SOX1O00570 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SOX1O00570 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms