Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AL133162.1-201ENST00000463228 453 ntBASIC4.19□□□□□ -1.74
GTF3C3Q9Y5Q9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.19□□□□□ -1.74
GTF3C3Q9Y5Q9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GTF3C3Q9Y5Q9 AL031274.2-201ENST00000599419 203 ntBASIC4.19□□□□□ -1.74
GTF3C3Q9Y5Q9 MIR6820-201ENST00000611508 62 ntBASIC4.19□□□□□ -1.74
GTF3C3Q9Y5Q9 AC006435.5-201ENST00000624486 112 ntBASIC4.19□□□□□ -1.74
GTF3C3Q9Y5Q9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
GTF3C3Q9Y5Q9 SNORD114-7-201ENST00000362520 77 ntBASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 Y_RNA.401-201ENST00000383965 117 ntBASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 Y_RNA.569-201ENST00000384749 103 ntBASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 MIR1253-201ENST00000408273 105 ntBASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 HMGB3P17-201ENST00000504195 649 ntBASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 FCF1P8-201ENST00000510322 597 ntBASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 MIR4277-201ENST00000578298 84 ntBASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 MIR5096-201ENST00000583713 70 ntBASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 AL445567.2-201ENST00000618935 498 ntBASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 SDR42E1P4-201ENST00000620894 481 ntBASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.18□□□□□ -1.74
GTF3C3Q9Y5Q9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GTF3C3Q9Y5Q9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
GTF3C3Q9Y5Q9 RNU6-271P-201ENST00000363858 105 ntBASIC4.17□□□□□ -1.74
GTF3C3Q9Y5Q9 MIR215-201ENST00000384858 110 ntBASIC4.17□□□□□ -1.74
GTF3C3Q9Y5Q9 U3.40-201ENST00000408706 208 ntBASIC4.17□□□□□ -1.74
GTF3C3Q9Y5Q9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.17□□□□□ -1.74
GTF3C3Q9Y5Q9 HSPE1P25-201ENST00000455484 251 ntBASIC4.17□□□□□ -1.74
GTF3C3Q9Y5Q9 AP001486.1-201ENST00000463339 476 ntBASIC4.17□□□□□ -1.74
GTF3C3Q9Y5Q9 RN7SL20P-201ENST00000488827 297 ntBASIC4.17□□□□□ -1.74
GTF3C3Q9Y5Q9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.17□□□□□ -1.74
GTF3C3Q9Y5Q9 AC106785.1-201ENST00000565935 262 ntBASIC4.17□□□□□ -1.74
GTF3C3Q9Y5Q9 IGHVIII-44-202ENST00000636235 289 ntBASIC4.17□□□□□ -1.74
GTF3C3Q9Y5Q9 AL159152.1-201ENST00000635019 2587 ntBASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 RNU6-326P-201ENST00000365480 107 ntBASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 AC010154.1-201ENST00000425857 269 ntBASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 RN7SL633P-201ENST00000488974 297 ntBASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 AL161756.2-201ENST00000604597 246 ntBASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 AC096577.2-201ENST00000611455 153 ntBASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GTF3C3Q9Y5Q9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
GTF3C3Q9Y5Q9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.15□□□□□ -1.74
GTF3C3Q9Y5Q9 AL391987.6-201ENST00000305671 199 ntBASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 MIR335-201ENST00000362173 94 ntBASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 Y_RNA.383-201ENST00000383855 97 ntBASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU6-710P-201ENST00000410424 105 ntBASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU6-1199P-201ENST00000411249 104 ntBASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 AL109933.2-201ENST00000452651 260 ntBASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 RPS27AP9-201ENST00000477681 438 ntBASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 RN7SL297P-201ENST00000483161 293 ntBASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 RN7SL636P-201ENST00000497504 294 ntBASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 MAPK10-266ENST00000641066 6555 ntBASIC4.15□□□□□ -1.75
GTF3C3Q9Y5Q9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 SNORD65B-201ENST00000459126 73 ntBASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU6-1338P-201ENST00000516328 91 ntBASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU2-31P-201ENST00000516954 155 ntBASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 SUMO2P18-201ENST00000518873 252 ntBASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 CYCSP30-201ENST00000546447 172 ntBASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 AC127459.3-201ENST00000624328 466 ntBASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GTF3C3Q9Y5Q9 RNA5SP51-201ENST00000364750 119 ntBASIC4.13□□□□□ -1.75
GTF3C3Q9Y5Q9 Y_RNA.396-201ENST00000383949 103 ntBASIC4.13□□□□□ -1.75
GTF3C3Q9Y5Q9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.13□□□□□ -1.75
GTF3C3Q9Y5Q9 AL353689.1-201ENST00000438895 199 ntBASIC4.13□□□□□ -1.75
GTF3C3Q9Y5Q9 AC025750.2-201ENST00000442609 450 ntBASIC4.13□□□□□ -1.75
GTF3C3Q9Y5Q9 AL139109.1-201ENST00000455491 297 ntBASIC4.13□□□□□ -1.75
GTF3C3Q9Y5Q9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.13□□□□□ -1.75
GTF3C3Q9Y5Q9 YPEL5P2-201ENST00000605553 359 ntBASIC4.13□□□□□ -1.75
GTF3C3Q9Y5Q9 AC005828.6-201ENST00000606610 232 ntBASIC4.13□□□□□ -1.75
GTF3C3Q9Y5Q9 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.13□□□□□ -1.75
GTF3C3Q9Y5Q9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
GTF3C3Q9Y5Q9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
GTF3C3Q9Y5Q9 AC010615.1-201ENST00000594254 1764 ntBASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 SNORD115-30-201ENST00000364117 82 ntBASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 Y_RNA.286-201ENST00000364813 102 ntBASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 RNU6-472P-201ENST00000384299 107 ntBASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 Y_RNA.541-201ENST00000384640 113 ntBASIC4.12□□□□□ -1.75
GTF3C3Q9Y5Q9 MIR181A2-201ENST00000384863 110 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms