Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HRH3Q9Y5N1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 Y_RNA.91-201ENST00000363042 107 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 Y_RNA.111-201ENST00000363248 100 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 RNA5SP322-201ENST00000363617 119 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 RNU6-1164P-201ENST00000364428 107 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 RNU6-309P-201ENST00000364573 106 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 RNU6-1240P-201ENST00000365155 104 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 RNU6-438P-201ENST00000365561 103 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 HMGN2P31-201ENST00000432430 273 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 MTCO1P44-201ENST00000441935 243 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 RPL27AP5-201ENST00000469428 449 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 AC099522.1-202ENST00000514718 367 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 Y_RNA.677-201ENST00000516401 85 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 Pinc.1-201ENST00000616452 154 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.84□□□□□ -1.79
HRH3Q9Y5N1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HRH3Q9Y5N1 AP001486.2-201ENST00000561652 5113 ntBASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 RNU1-89P-201ENST00000384592 164 ntBASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 U6atac.2-201ENST00000408644 118 ntBASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 RPL21P10-201ENST00000463521 490 ntBASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 RPS29P19-201ENST00000479709 171 ntBASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 OR9P1P-201ENST00000496431 281 ntBASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 RNU6-781P-201ENST00000516377 101 ntBASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 AL022345.2-201ENST00000606307 135 ntBASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 AC013412.1-201ENST00000610687 192 ntBASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 JPX_2.1-201ENST00000614161 69 ntBASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
HRH3Q9Y5N1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 MIR450A1-201ENST00000362262 91 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 Y_RNA.116-201ENST00000363292 103 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 Y_RNA.369-201ENST00000365568 117 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 RNU6-1235P-201ENST00000384559 107 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 MIR624-201ENST00000385217 97 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 RNA5SP354-201ENST00000391247 136 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 AC063976.3-201ENST00000426849 329 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 RNU6-498P-201ENST00000459468 107 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 RPL21P129-201ENST00000491732 478 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 RNU6-365P-201ENST00000517113 106 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 AC025647.1-201ENST00000517879 253 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HRH3Q9Y5N1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 RNU1-15P-201ENST00000353977 144 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 MIR423-201ENST00000362201 94 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 RNU6-117P-201ENST00000365415 107 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 MIR23B-201ENST00000384832 97 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 Z98941.1-201ENST00000407764 100 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 RNY4P30-201ENST00000410216 95 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 RNU6-628P-201ENST00000410675 107 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 RNA5SP306-201ENST00000411087 107 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 AL162151.2-201ENST00000448875 158 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 ATP5EP1-201ENST00000510257 156 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 AC244505.7-201ENST00000599675 272 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 MIR6875-201ENST00000617506 72 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 MTND5P18-201ENST00000445624 1801 ntBASIC3.81□□□□□ -1.8
HRH3Q9Y5N1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
HRH3Q9Y5N1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.8□□□□□ -1.8
HRH3Q9Y5N1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HRH3Q9Y5N1 Y_RNA.52-201ENST00000362760 96 ntBASIC3.8□□□□□ -1.8
HRH3Q9Y5N1 AF228730.3-201ENST00000436691 102 ntBASIC3.8□□□□□ -1.8
HRH3Q9Y5N1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.8□□□□□ -1.8
HRH3Q9Y5N1 RN7SL542P-201ENST00000467147 294 ntBASIC3.8□□□□□ -1.8
HRH3Q9Y5N1 RNU2-34P-201ENST00000516534 121 ntBASIC3.8□□□□□ -1.8
HRH3Q9Y5N1 SNORA67.7-201ENST00000516664 135 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms