Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RNA5SP367-201ENST00000516557 118 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-1098P-201ENST00000516772 96 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 AC107016.2-201ENST00000547968 190 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 AC023043.3-201ENST00000593113 385 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 MZT1P2-201ENST00000604387 248 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 AC107871.2-201ENST00000612894 502 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 Z82195.2-201ENST00000612348 18351 ntBASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 RNA5SP125-201ENST00000364843 120 ntBASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 SNORD31B-201ENST00000364977 69 ntBASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 Y_RNA.462-201ENST00000384268 102 ntBASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 MIR586-201ENST00000385035 97 ntBASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 MIR181B1-201ENST00000385240 110 ntBASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 MIR549A-201ENST00000385268 96 ntBASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 AP004217.1-201ENST00000480579 346 ntBASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 MRPS35P2-201ENST00000508242 191 ntBASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 RRN3P3-201ENST00000549207 578 ntBASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHGA3Q9Y5H0 AC096644.4-201ENST00000563417 2912 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 Y_RNA.230-201ENST00000364348 109 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-438P-201ENST00000365561 103 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-1105P-201ENST00000384774 107 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 SNORD67-201ENST00000390833 111 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 MIR1302-3-201ENST00000408128 138 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU5A-5P-201ENST00000411054 116 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 AC009238.1-201ENST00000442165 424 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 AL135938.1-201ENST00000443141 297 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 AC009237.6-201ENST00000446969 424 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 AC117440.1-201ENST00000474107 571 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 RPS29P26-201ENST00000477483 171 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 DEFB131C-201ENST00000528817 165 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 GTF3AP2-201ENST00000557014 266 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 MIR4753-201ENST00000585119 83 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 AC008873.1-201ENST00000625051 138 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 AC009487.4-201ENST00000624969 3585 ntBASIC2.87□□□□□ -1.95
PCDHGA3Q9Y5H0 AC135776.4-201ENST00000624300 1904 ntBASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 U3.8-201ENST00000363675 217 ntBASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 SNORA38-201ENST00000363946 132 ntBASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 Y_RNA.210-201ENST00000364161 110 ntBASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-1109P-201ENST00000391187 107 ntBASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 MIR548F4-201ENST00000408515 105 ntBASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 MTND3P2-201ENST00000438452 342 ntBASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 AC018448.1-201ENST00000552843 316 ntBASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 AC008269.2-201ENST00000561915 1105 ntBASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 U6.104-201ENST00000637979 90 ntBASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 AP006437.1-201ENST00000641440 3685 ntBASIC2.86□□□□□ -1.95
PCDHGA3Q9Y5H0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU1-23P-201ENST00000363361 144 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-770P-201ENST00000363929 105 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-926P-201ENST00000384075 107 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 SNORD63-201ENST00000384262 68 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 MIR1283-1-201ENST00000408494 87 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 SNORD88.1-201ENST00000408684 91 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 AL731563.1-201ENST00000442202 214 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-625P-201ENST00000459412 107 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 AC010655.3-201ENST00000478818 450 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 SRIP1-201ENST00000489235 288 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-635P-201ENST00000516651 102 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-897P-201ENST00000517135 105 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 AC130454.1-201ENST00000622948 401 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 LINC02555-201ENST00000563933 1951 ntBASIC2.85□□□□□ -1.95
PCDHGA3Q9Y5H0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 AC073325.2-201ENST00000339545 159 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 MIR410-201ENST00000362222 80 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-1309P-201ENST00000363305 108 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 Y_RNA.133-201ENST00000363428 110 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-727P-201ENST00000363592 107 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms