Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNTN3Q9P232 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNTN3Q9P232 MIR208A-201ENST00000362287 71 ntBASIC3.81□□□□□ -1.8
CNTN3Q9P232 snoU2_19.1-201ENST00000362361 80 ntBASIC3.81□□□□□ -1.8
CNTN3Q9P232 Y_RNA.81-201ENST00000362997 102 ntBASIC3.81□□□□□ -1.8
CNTN3Q9P232 RNU6-283P-201ENST00000364788 107 ntBASIC3.81□□□□□ -1.8
CNTN3Q9P232 MIR490-201ENST00000384865 128 ntBASIC3.81□□□□□ -1.8
CNTN3Q9P232 Y_RNA.629-201ENST00000411368 105 ntBASIC3.81□□□□□ -1.8
CNTN3Q9P232 RN7SL594P-201ENST00000470590 287 ntBASIC3.81□□□□□ -1.8
CNTN3Q9P232 AC093663.1-201ENST00000497190 394 ntBASIC3.81□□□□□ -1.8
CNTN3Q9P232 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.81□□□□□ -1.8
CNTN3Q9P232 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.81□□□□□ -1.8
CNTN3Q9P232 AC090616.3-201ENST00000582184 217 ntBASIC3.81□□□□□ -1.8
CNTN3Q9P232 AC107294.3-201ENST00000609211 526 ntBASIC3.81□□□□□ -1.8
CNTN3Q9P232 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNTN3Q9P232 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.81□□□□□ -1.8
CNTN3Q9P232 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNTN3Q9P232 AC091564.4-201ENST00000533934 2194 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNTN3Q9P232 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.8□□□□□ -1.8
CNTN3Q9P232 RNU4-35P-201ENST00000362588 141 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 RNU6-1048P-201ENST00000364054 107 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 SNORD46.1-201ENST00000364139 104 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 RNU6-1305P-201ENST00000364353 104 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 SNORD17-201ENST00000390930 237 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 SNORA48.5-201ENST00000391143 135 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 AC006989.1-201ENST00000427212 131 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 RNU7-141P-201ENST00000459304 62 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 snoU13.22-201ENST00000459428 104 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.8□□□□□ -1.8
CNTN3Q9P232 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.8□□□□□ -1.8
CNTN3Q9P232 MIR4738-201ENST00000579134 87 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNTN3Q9P232 AL670379.2-201ENST00000604983 252 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 AC025754.2-201ENST00000606491 432 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.8□□□□□ -1.8
CNTN3Q9P232 AL365222.1-201ENST00000614661 98 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.8□□□□□ -1.8
CNTN3Q9P232 AL356274.2-201ENST00000624379 3752 ntBASIC3.8□□□□□ -1.8
CNTN3Q9P232 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CNTN3Q9P232 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNTN3Q9P232 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.8□□□□□ -1.8
CNTN3Q9P232 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTN3Q9P232 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.79□□□□□ -1.8
CNTN3Q9P232 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNTN3Q9P232 AC100821.1-201ENST00000523153 2479 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTN3Q9P232 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTN3Q9P232 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.79□□□□□ -1.8
CNTN3Q9P232 RNA5SP50-201ENST00000363731 107 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 RNU1-33P-201ENST00000364249 162 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 RNU4-10P-201ENST00000364383 140 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 RNU6-818P-201ENST00000364837 108 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 SNORA70.4-201ENST00000365509 134 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 RNU6-969P-201ENST00000383900 105 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 MIR29B2-201ENST00000385055 81 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 RN7SKP111-201ENST00000410349 271 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 AC097463.2-201ENST00000421074 142 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 CYCSP35-201ENST00000451978 304 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 PRSS3P4-201ENST00000453323 162 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 AC008155.2-201ENST00000464337 397 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 AC025518.1-201ENST00000479856 347 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.79□□□□□ -1.8
CNTN3Q9P232 AC008739.2-201ENST00000597006 317 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CNTN3Q9P232 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTN3Q9P232 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CNTN3Q9P232 AC068700.1-201ENST00000565862 3754 ntBASIC3.79□□□□□ -1.8
CNTN3Q9P232 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
CNTN3Q9P232 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNTN3Q9P232 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.78□□□□□ -1.8
CNTN3Q9P232 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CNTN3Q9P232 RNA5SP72-201ENST00000364442 117 ntBASIC3.78□□□□□ -1.8
CNTN3Q9P232 SNORD32B-201ENST00000364460 84 ntBASIC3.78□□□□□ -1.8
CNTN3Q9P232 RNU4-11P-201ENST00000365287 132 ntBASIC3.78□□□□□ -1.8
CNTN3Q9P232 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CNTN3Q9P232 MIR34B-201ENST00000385076 84 ntBASIC3.78□□□□□ -1.8
CNTN3Q9P232 RNU6-1228P-201ENST00000391014 107 ntBASIC3.78□□□□□ -1.8
CNTN3Q9P232 MIR1185-2-201ENST00000408687 86 ntBASIC3.78□□□□□ -1.8
CNTN3Q9P232 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.78□□□□□ -1.8
CNTN3Q9P232 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CNTN3Q9P232 RPS27P26-201ENST00000494583 239 ntBASIC3.78□□□□□ -1.8
CNTN3Q9P232 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.78□□□□□ -1.8
CNTN3Q9P232 MIR3186-201ENST00000577404 85 ntBASIC3.78□□□□□ -1.8
CNTN3Q9P232 MIR4724-201ENST00000579485 89 ntBASIC3.78□□□□□ -1.8
CNTN3Q9P232 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.78□□□□□ -1.8
CNTN3Q9P232 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.78□□□□□ -1.8
CNTN3Q9P232 AC099778.2-201ENST00000610904 211 ntBASIC3.78□□□□□ -1.8
CNTN3Q9P232 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.78□□□□□ -1.8
CNTN3Q9P232 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CNTN3Q9P232 AL159152.1-201ENST00000635019 2587 ntBASIC3.78□□□□□ -1.8
CNTN3Q9P232 AC000403.1-201ENST00000613696 3585 ntBASIC3.78□□□□□ -1.8
CNTN3Q9P232 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.78□□□□□ -1.81
CNTN3Q9P232 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CNTN3Q9P232 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CNTN3Q9P232 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTN3Q9P232 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTN3Q9P232 AL513302.2-201ENST00000562313 1842 ntBASIC3.77□□□□□ -1.81
CNTN3Q9P232 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 231.6 ms