Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 FAM27D1-201ENST00000612308 341 ntBASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 AC009831.4-201ENST00000620744 325 ntBASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 UCA1.1-201ENST00000620952 75 ntBASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 AC112484.5-201ENST00000624189 228 ntBASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CUEDC1Q9NWM3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 RNA5SP387-201ENST00000364226 106 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 RNU4-41P-201ENST00000364426 143 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 SNORA18.2-201ENST00000383865 132 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 SNORA51.5-201ENST00000384126 131 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 SNORA72-201ENST00000384339 132 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 MIR200C-201ENST00000384980 68 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 MIR513A2-201ENST00000385249 127 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 SNORD12C-201ENST00000386307 89 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 RNU6ATAC-201ENST00000408749 126 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 MTATP6P21-201ENST00000440681 189 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 AL592156.1-201ENST00000508758 304 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 RNU2-44P-201ENST00000516795 194 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 RNU1-104P-201ENST00000517280 175 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 AC025647.1-201ENST00000517879 253 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 AC007012.1-201ENST00000567192 175 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 AC091152.3-201ENST00000604227 325 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 AL022345.2-201ENST00000606307 135 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 MIR8059-201ENST00000620427 81 ntBASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.07□□□□□ -1.76
CUEDC1Q9NWM3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 MAPK10-253ENST00000641010 4072 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 MIR208A-201ENST00000362287 71 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 Y_RNA.333-201ENST00000365274 102 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 RNU6-748P-201ENST00000384648 107 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 MIR548B-201ENST00000385247 97 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 snoU13.14-201ENST00000459372 104 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 RPL23AP54-201ENST00000495129 419 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 RNU6-970P-201ENST00000516312 107 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 RNU6-1337P-201ENST00000516525 95 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 PRELID2P1-201ENST00000552837 301 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 AC005972.2-201ENST00000604690 348 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 AC025521.1-201ENST00000621624 286 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 AC103988.1-201ENST00000566382 2177 ntBASIC4.06□□□□□ -1.76
CUEDC1Q9NWM3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 AC016588.2-201ENST00000632484 3021 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 AC091564.4-201ENST00000533934 2194 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 RNA5SP125-201ENST00000364843 120 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 RNA5SP173-201ENST00000364857 136 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 Y_RNA.544-201ENST00000384650 113 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 MIR449B-201ENST00000384995 97 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 SNORA26-201ENST00000391286 122 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 ARF4P2-201ENST00000430209 526 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 RPS29P12-201ENST00000460178 152 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 SCARNA13-201ENST00000516672 275 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 AC062037.1-201ENST00000605302 128 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 RNU6-91P-201ENST00000607774 107 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 AC093732.2-201ENST00000607950 274 ntBASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CUEDC1Q9NWM3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 MIR570-201ENST00000384917 97 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 MIR891A-201ENST00000401237 79 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 MIR1179-201ENST00000408703 91 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 RNU2-70P-201ENST00000410718 179 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 RNA5SP136-201ENST00000410906 107 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 CYCSP19-201ENST00000411715 316 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 AC009414.1-201ENST00000427200 443 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 PRSS3P4-201ENST00000453323 162 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 RNU7-170P-201ENST00000459303 61 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 AC022655.2-201ENST00000577280 318 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 RPL17P51-201ENST00000605218 238 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 MIR1245B-201ENST00000636115 69 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 AL353746.1-201ENST00000566293 6881 ntBASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
CUEDC1Q9NWM3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CUEDC1Q9NWM3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 217.2 ms