Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.05□□□□□ -1.92
VTA1Q9NP79 SNORD11B-201ENST00000607707 90 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.05□□□□□ -1.92
VTA1Q9NP79 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 U6.104-201ENST00000637979 90 ntBASIC3.05□□□□□ -1.92
VTA1Q9NP79 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.05□□□□□ -1.92
VTA1Q9NP79 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
VTA1Q9NP79 Y_RNA.144-201ENST00000363521 113 ntBASIC3.04□□□□□ -1.92
VTA1Q9NP79 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
VTA1Q9NP79 RNU6-1274P-201ENST00000384557 107 ntBASIC3.04□□□□□ -1.92
VTA1Q9NP79 RNU6-1001P-201ENST00000411265 100 ntBASIC3.04□□□□□ -1.92
VTA1Q9NP79 AL390729.2-201ENST00000416137 156 ntBASIC3.04□□□□□ -1.92
VTA1Q9NP79 AC003685.2-201ENST00000422795 395 ntBASIC3.04□□□□□ -1.92
VTA1Q9NP79 Z96811.1-201ENST00000445880 108 ntBASIC3.04□□□□□ -1.92
VTA1Q9NP79 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.04□□□□□ -1.92
VTA1Q9NP79 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.04□□□□□ -1.92
VTA1Q9NP79 RNU6-635P-201ENST00000516651 102 ntBASIC3.04□□□□□ -1.92
VTA1Q9NP79 AC109329.2-201ENST00000519658 482 ntBASIC3.04□□□□□ -1.92
VTA1Q9NP79 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
VTA1Q9NP79 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.04□□□□□ -1.92
VTA1Q9NP79 MIR5006-201ENST00000583027 110 ntBASIC3.04□□□□□ -1.92
VTA1Q9NP79 MIR3117-201ENST00000584034 78 ntBASIC3.04□□□□□ -1.92
VTA1Q9NP79 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.04□□□□□ -1.92
VTA1Q9NP79 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
VTA1Q9NP79 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.04□□□□□ -1.92
VTA1Q9NP79 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.04□□□□□ -1.92
VTA1Q9NP79 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VTA1Q9NP79 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VTA1Q9NP79 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.03□□□□□ -1.92
VTA1Q9NP79 RNU6-770P-201ENST00000363929 105 ntBASIC3.03□□□□□ -1.92
VTA1Q9NP79 Y_RNA.230-201ENST00000364348 109 ntBASIC3.03□□□□□ -1.92
VTA1Q9NP79 RNU6-708P-201ENST00000384217 107 ntBASIC3.03□□□□□ -1.92
VTA1Q9NP79 RPL21P1-201ENST00000399532 476 ntBASIC3.03□□□□□ -1.92
VTA1Q9NP79 RNA5SP508-201ENST00000411327 119 ntBASIC3.03□□□□□ -1.92
VTA1Q9NP79 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.03□□□□□ -1.92
VTA1Q9NP79 NDUFB4P10-201ENST00000452541 359 ntBASIC3.03□□□□□ -1.92
VTA1Q9NP79 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.03□□□□□ -1.92
VTA1Q9NP79 RNA5SP148-201ENST00000516527 94 ntBASIC3.03□□□□□ -1.92
VTA1Q9NP79 RNU6-897P-201ENST00000517135 105 ntBASIC3.03□□□□□ -1.92
VTA1Q9NP79 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.03□□□□□ -1.92
VTA1Q9NP79 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.03□□□□□ -1.92
VTA1Q9NP79 MIR3605-201ENST00000583214 100 ntBASIC3.03□□□□□ -1.92
VTA1Q9NP79 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.03□□□□□ -1.92
VTA1Q9NP79 7SK.10-201ENST00000621414 298 ntBASIC3.03□□□□□ -1.92
VTA1Q9NP79 AC130454.1-201ENST00000622948 401 ntBASIC3.03□□□□□ -1.92
VTA1Q9NP79 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VTA1Q9NP79 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.03□□□□□ -1.92
VTA1Q9NP79 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VTA1Q9NP79 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.93
VTA1Q9NP79 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
VTA1Q9NP79 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.02□□□□□ -1.93
VTA1Q9NP79 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VTA1Q9NP79 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.02□□□□□ -1.93
VTA1Q9NP79 RNA5SP361-201ENST00000362686 118 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 Y_RNA.47-201ENST00000362697 108 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 SNORA18.2-201ENST00000383865 132 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 RNU6-1310P-201ENST00000384153 107 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 SNORD63-201ENST00000384262 68 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 RNU6-196P-201ENST00000384315 107 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 RNU6-713P-201ENST00000384761 107 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 MIR561-201ENST00000385216 97 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 RNU6-220P-201ENST00000390919 107 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 MIR300-201ENST00000401138 83 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 OOSP1P1-201ENST00000423265 274 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.02□□□□□ -1.93
VTA1Q9NP79 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.02□□□□□ -1.93
VTA1Q9NP79 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.02□□□□□ -1.93
VTA1Q9NP79 AL445687.1-201ENST00000439946 251 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 AC010095.1-201ENST00000443543 144 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 RPL39P40-201ENST00000445481 146 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.02□□□□□ -1.93
VTA1Q9NP79 RNA5SP282-201ENST00000516355 108 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 AC091544.4-201ENST00000555268 342 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.02□□□□□ -1.93
VTA1Q9NP79 AP000942.4-201ENST00000604811 241 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 RAC1P9-201ENST00000604990 392 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 MIR6733-201ENST00000635723 61 ntBASIC3.02□□□□□ -1.93
VTA1Q9NP79 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VTA1Q9NP79 LINC02555-201ENST00000563933 1951 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
VTA1Q9NP79 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VTA1Q9NP79 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
VTA1Q9NP79 Y_RNA.214-201ENST00000364201 112 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 SET-203ENST00000372688 801 ntTSL 2 BASIC3.01□□□□□ -1.93
VTA1Q9NP79 SNORA67.4-201ENST00000384688 142 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 RNU5A-5P-201ENST00000411054 116 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
VTA1Q9NP79 AL451074.5-201ENST00000415894 435 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 IFNA11P-201ENST00000446352 526 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 SNORA40.9-201ENST00000515895 93 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 RNA5SP76-201ENST00000516277 87 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 RNU5F-4P-201ENST00000516581 114 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 AC022616.8-201ENST00000533569 253 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 U4atac.1-201ENST00000618345 95 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 AC068205.3-201ENST00000636385 468 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 AC009487.4-201ENST00000624969 3585 ntBASIC3.01□□□□□ -1.93
VTA1Q9NP79 RNU6-546P-201ENST00000383991 107 ntBASIC3□□□□□ -1.93
VTA1Q9NP79 RNU2-25P-201ENST00000411041 191 ntBASIC3□□□□□ -1.93
VTA1Q9NP79 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3□□□□□ -1.93
VTA1Q9NP79 AC092427.1-202ENST00000430569 476 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms