Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 AC064807.4-201ENST00000607201 407 ntBASIC1.19□□□□□ -2.22
LHX5Q9H2C1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.19□□□□□ -2.22
LHX5Q9H2C1 MIR7111-201ENST00000619751 72 ntBASIC1.19□□□□□ -2.22
LHX5Q9H2C1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.19□□□□□ -2.22
LHX5Q9H2C1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.19□□□□□ -2.22
LHX5Q9H2C1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
LHX5Q9H2C1 AC092268.1-201ENST00000342691 405 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 MIR96-201ENST00000362288 78 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 RNU6-254P-201ENST00000363377 107 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 Y_RNA.796-201ENST00000364268 102 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 Y_RNA.256-201ENST00000364594 104 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 Y_RNA.799-201ENST00000364992 102 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 SNORD114-22-201ENST00000365423 72 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 Y_RNA.504-201ENST00000384481 104 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 RNU6-1106P-201ENST00000390845 107 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 RPL9P9-202ENST00000466501 579 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.18□□□□□ -2.22
LHX5Q9H2C1 MIR449C-201ENST00000516047 92 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 Y_RNA.665-201ENST00000516177 98 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 SCOCP1-201ENST00000554676 349 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.18□□□□□ -2.22
LHX5Q9H2C1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.18□□□□□ -2.22
LHX5Q9H2C1 MIR3923-201ENST00000579521 83 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 AC004492.1-201ENST00000607036 742 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 PCGEM1.1-201ENST00000613431 131 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 AC024614.3-201ENST00000637860 256 ntBASIC1.18□□□□□ -2.22
LHX5Q9H2C1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
LHX5Q9H2C1 RNU6-227P-201ENST00000362865 103 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 RNY4P14-201ENST00000363656 96 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 SNORD114-6-201ENST00000364393 72 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 RNU6-1317P-201ENST00000364582 104 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 Y_RNA.373-201ENST00000365600 103 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 RNU6-378P-201ENST00000384324 107 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 Y_RNA.516-201ENST00000384541 124 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
LHX5Q9H2C1 MIR450B-201ENST00000401182 78 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 MTCO1P21-201ENST00000416634 589 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.17□□□□□ -2.22
LHX5Q9H2C1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LHX5Q9H2C1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.17□□□□□ -2.22
LHX5Q9H2C1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.17□□□□□ -2.22
LHX5Q9H2C1 AC007547.1-201ENST00000462177 490 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 HMGN2P26-201ENST00000463169 339 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 AC130509.1-201ENST00000464158 433 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.17□□□□□ -2.22
LHX5Q9H2C1 RNU6-1332P-201ENST00000516666 104 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 SUB1P4-201ENST00000566062 339 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 CPDP1-201ENST00000579660 283 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 AC100830.2-201ENST00000581636 240 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 AC005786.1-201ENST00000588553 154 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 Z98751.3-201ENST00000604447 521 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 CTHRC1P1-201ENST00000605383 469 ntBASIC1.17□□□□□ -2.22
LHX5Q9H2C1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.17□□□□□ -2.22
LHX5Q9H2C1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.17□□□□□ -2.22
LHX5Q9H2C1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.17□□□□□ -2.22
LHX5Q9H2C1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
LHX5Q9H2C1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
LHX5Q9H2C1 LINC02555-201ENST00000563933 1951 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 SNORD114-27-201ENST00000363766 70 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 RNU4-56P-201ENST00000364700 142 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 Y_RNA.402-201ENST00000383972 102 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 RNU6-26P-201ENST00000383985 107 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
LHX5Q9H2C1 RNU6-332P-201ENST00000391193 108 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 RPL21P1-201ENST00000399532 476 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.16□□□□□ -2.22
LHX5Q9H2C1 MTND3P9-201ENST00000429526 346 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 USP9YP28-201ENST00000435142 589 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 MTCO1P44-201ENST00000441935 243 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.16□□□□□ -2.22
LHX5Q9H2C1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AC099513.1-201ENST00000490423 301 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AC091435.1-201ENST00000505442 584 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AC005741.1-201ENST00000511094 432 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.16□□□□□ -2.22
LHX5Q9H2C1 Y_RNA.655-201ENST00000515919 96 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 MTND1P35-201ENST00000526739 508 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AC109635.3-201ENST00000529536 185 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AC021231.3-201ENST00000558497 370 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AC109446.1-201ENST00000566172 220 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 CYP4A27P-201ENST00000567218 190 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AC012557.2-201ENST00000605919 418 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AL355802.3-201ENST00000607571 545 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 RMST_3.1-201ENST00000611651 109 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AC005520.5-201ENST00000613926 164 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 AC009541.1-201ENST00000438279 2662 ntBASIC1.16□□□□□ -2.22
LHX5Q9H2C1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
LHX5Q9H2C1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
LHX5Q9H2C1 Y_RNA.9-201ENST00000362354 101 ntBASIC1.15□□□□□ -2.23
LHX5Q9H2C1 RNU6-414P-201ENST00000363705 104 ntBASIC1.15□□□□□ -2.23
LHX5Q9H2C1 RNU6-214P-201ENST00000384130 107 ntBASIC1.15□□□□□ -2.23
LHX5Q9H2C1 Y_RNA.450-201ENST00000384198 113 ntBASIC1.15□□□□□ -2.23
LHX5Q9H2C1 RNU1-78P-201ENST00000391248 165 ntBASIC1.15□□□□□ -2.23
LHX5Q9H2C1 RNU2-41P-201ENST00000410991 178 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms