Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 Y_RNA.198-201ENST00000364013 98 ntBASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 Y_RNA.366-201ENST00000365540 102 ntBASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 AC027124.2-201ENST00000428249 105 ntBASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 AC007751.1-201ENST00000529260 376 ntBASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 AC019288.1-201ENST00000557918 224 ntBASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP3Q9BZ76 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 CPHL1P-201ENST00000461341 3407 ntBASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 AC007496.3-201ENST00000624987 3443 ntBASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 AF117829.1-206ENST00000621883 3802 ntBASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 Y_RNA.73-201ENST00000362910 113 ntBASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 RNU6-242P-201ENST00000384359 107 ntBASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 MIR873-201ENST00000401120 77 ntBASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 AC091826.1-201ENST00000514065 313 ntBASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 MIR5006-201ENST00000583027 110 ntBASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 IGLL4P-201ENST00000614590 133 ntBASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.02□□□□□ -1.77
CNTNAP3Q9BZ76 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 Y_RNA.290-201ENST00000364879 114 ntBASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 SNORA26-201ENST00000391286 122 ntBASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 AC007064.1-201ENST00000412238 351 ntBASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 AL157831.1-201ENST00000426134 473 ntBASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 AC012671.1-201ENST00000451912 203 ntBASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 SRIP1-201ENST00000489235 288 ntBASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 RNU2-13P-201ENST00000515909 113 ntBASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 AC084364.2-201ENST00000546924 395 ntBASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 MIR4666B-201ENST00000578142 81 ntBASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 AL034555.1-201ENST00000604816 211 ntBASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 MIR6076-201ENST00000617521 113 ntBASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3Q9BZ76 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 Y_RNA.66-201ENST00000362862 102 ntBASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 RNU6-24P-201ENST00000384440 107 ntBASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 AL355796.1-201ENST00000406706 323 ntBASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 AC245291.1-201ENST00000419501 328 ntBASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 EIF4A1P12-201ENST00000551910 141 ntBASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 HMGN2P15-201ENST00000585707 270 ntBASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CNTNAP3Q9BZ76 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNTNAP3Q9BZ76 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CNTNAP3Q9BZ76 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CNTNAP3Q9BZ76 Y_RNA.313-201ENST00000365095 103 ntBASIC3.99□□□□□ -1.77
CNTNAP3Q9BZ76 MIR921-201ENST00000401133 56 ntBASIC3.99□□□□□ -1.77
CNTNAP3Q9BZ76 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.99□□□□□ -1.77
CNTNAP3Q9BZ76 AL121890.1-201ENST00000435457 205 ntBASIC3.99□□□□□ -1.77
CNTNAP3Q9BZ76 AC069285.2-201ENST00000440210 275 ntBASIC3.99□□□□□ -1.77
CNTNAP3Q9BZ76 RN7SL601P-201ENST00000471221 293 ntBASIC3.99□□□□□ -1.77
CNTNAP3Q9BZ76 AC104619.4-201ENST00000510773 249 ntBASIC3.99□□□□□ -1.77
CNTNAP3Q9BZ76 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms