Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 Y_RNA.124-201ENST00000363339 93 ntBASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 MIR548B-201ENST00000385247 97 ntBASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 RNU6-972P-201ENST00000391208 107 ntBASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 Y_RNA.593-201ENST00000410292 98 ntBASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 RPS29P4-201ENST00000414733 161 ntBASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 AC002075.2-201ENST00000425207 252 ntBASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 RPL23AP62-201ENST00000463396 453 ntBASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 AL136360.1-201ENST00000503377 1900 ntBASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.64□□□□□ -1.67
NKX2-3Q8TAU0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 AL645939.1-201ENST00000453429 797 ntBASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 RN7SL323P-201ENST00000494712 295 ntBASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 AC068339.1-201ENST00000526965 141 ntBASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 AL137067.1-201ENST00000615933 120 ntBASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 U6.105-201ENST00000637379 88 ntBASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.63□□□□□ -1.67
NKX2-3Q8TAU0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 U8.11-201ENST00000384699 133 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 MIR218-2-201ENST00000385006 110 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 MIR93-201ENST00000385024 80 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 MIR181B1-201ENST00000385240 110 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 MIR325-201ENST00000385260 98 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 SNORA3C-201ENST00000408792 125 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 AC007064.1-201ENST00000412238 351 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 VDAC1P3-201ENST00000434069 851 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 AC023449.1-201ENST00000454464 154 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 U8.18-201ENST00000459285 133 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 AC083906.5-201ENST00000503722 328 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 RNA5SP468-201ENST00000516782 93 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 RNU2-44P-201ENST00000516795 194 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 IGKV3-31-201ENST00000523109 329 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 NEAT1-202ENST00000501122 22743 ntBASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NKX2-3Q8TAU0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 Y_RNA.17-201ENST00000362433 111 ntBASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 Y_RNA.198-201ENST00000364013 98 ntBASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 RNA5SP167-201ENST00000365461 116 ntBASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 Y_RNA.362-201ENST00000365518 110 ntBASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 SNORA18.2-201ENST00000383865 132 ntBASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 RNU6-279P-201ENST00000391297 101 ntBASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 RNU6-581P-201ENST00000516214 105 ntBASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 RNA5SP490-201ENST00000517141 136 ntBASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 FAM71BP1-201ENST00000604431 523 ntBASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 MIR7975-201ENST00000619350 68 ntBASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.61□□□□□ -1.67
NKX2-3Q8TAU0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 RNU6-271P-201ENST00000363858 105 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 RNU6-884P-201ENST00000363889 107 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 RNU6-1197P-201ENST00000391183 107 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 MIR1185-2-201ENST00000408687 86 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 SNORA19.1-201ENST00000410656 129 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 AL139247.1-201ENST00000422768 325 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 HMGN2P10-201ENST00000448085 265 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 RPL39P39-201ENST00000455840 151 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 RNU6-893P-201ENST00000458841 100 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 RN7SL293P-201ENST00000481765 281 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 RPL32P34-201ENST00000486380 400 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 AC139453.2-201ENST00000487255 133 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 RNA5SP208-201ENST00000516156 78 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 RNA5SP367-201ENST00000516557 118 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 MIR4662B-201ENST00000579498 81 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 MIR2681-201ENST00000581814 105 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 AC244505.7-201ENST00000599675 272 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NKX2-3Q8TAU0 MFSD8-236ENST00000641509 4050 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms