Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 SNORA70.19-201ENST00000516717 90 ntBASIC1.9□□□□□ -2.11
LCE4AQ5TA78 GTF3AP2-201ENST00000557014 266 ntBASIC1.9□□□□□ -2.11
LCE4AQ5TA78 MIR3934-201ENST00000579806 107 ntBASIC1.9□□□□□ -2.11
LCE4AQ5TA78 MIR4264-201ENST00000583520 66 ntBASIC1.9□□□□□ -2.11
LCE4AQ5TA78 SCARNA17.4-201ENST00000614296 143 ntBASIC1.9□□□□□ -2.11
LCE4AQ5TA78 AL139099.4-201ENST00000614802 114 ntBASIC1.9□□□□□ -2.11
LCE4AQ5TA78 AC120057.5-201ENST00000623840 154 ntBASIC1.9□□□□□ -2.11
LCE4AQ5TA78 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 AL161431.1-201ENST00000618966 4205 ntBASIC1.9□□□□□ -2.11
LCE4AQ5TA78 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 NBPF8-201ENST00000583271 5330 ntBASIC1.9□□□□□ -2.11
LCE4AQ5TA78 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC1.9□□□□□ -2.11
LCE4AQ5TA78 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 ALG13-225ENST00000621367 3893 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 RNA5SP48-201ENST00000363969 126 ntBASIC1.89□□□□□ -2.11
LCE4AQ5TA78 U8.13-201ENST00000390842 128 ntBASIC1.89□□□□□ -2.11
LCE4AQ5TA78 RNA5SP38-201ENST00000410750 119 ntBASIC1.89□□□□□ -2.11
LCE4AQ5TA78 AC093162.1-201ENST00000419682 124 ntBASIC1.89□□□□□ -2.11
LCE4AQ5TA78 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 RPS29P33-201ENST00000456717 146 ntBASIC1.89□□□□□ -2.11
LCE4AQ5TA78 RN7SL604P-201ENST00000492589 296 ntBASIC1.89□□□□□ -2.11
LCE4AQ5TA78 RN7SL447P-201ENST00000494711 245 ntBASIC1.89□□□□□ -2.11
LCE4AQ5TA78 MIR548AL-201ENST00000578416 97 ntBASIC1.89□□□□□ -2.11
LCE4AQ5TA78 MIR1254-2-201ENST00000579553 63 ntBASIC1.89□□□□□ -2.11
LCE4AQ5TA78 AL132640.3-201ENST00000630473 177 ntBASIC1.89□□□□□ -2.11
LCE4AQ5TA78 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE4AQ5TA78 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 SNORA25.3-201ENST00000363205 127 ntBASIC1.88□□□□□ -2.11
LCE4AQ5TA78 RNU6-23P-201ENST00000363283 107 ntBASIC1.88□□□□□ -2.11
LCE4AQ5TA78 MIR203A-201ENST00000384836 110 ntBASIC1.88□□□□□ -2.11
LCE4AQ5TA78 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.88□□□□□ -2.11
LCE4AQ5TA78 AC025033.1-201ENST00000463883 194 ntBASIC1.88□□□□□ -2.11
LCE4AQ5TA78 RNU7-174P-201ENST00000516248 59 ntBASIC1.88□□□□□ -2.11
LCE4AQ5TA78 SNORA25.16-201ENST00000516741 121 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms