Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 AC010975.3-201ENST00000618727 978 ntBASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 RNU6-1249P-201ENST00000363237 111 ntBASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 RNU6-194P-201ENST00000363862 105 ntBASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 RNY1P2-201ENST00000364820 117 ntBASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 AC245047.8-201ENST00000456455 284 ntBASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.39□□□□□ -2.47
UBR4Q5T4S7 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 MIR320B1-201ENST00000390209 79 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AL355994.1-201ENST00000424379 260 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 FO393419.3-201ENST00000428741 282 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 MTCO1P19-201ENST00000443487 500 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 RNU6-412P-201ENST00000516434 106 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AC017104.5-201ENST00000637647 639 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 RNU6-486P-201ENST00000363116 107 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 RNU6-216P-201ENST00000363282 104 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 MIR888-201ENST00000401186 77 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 RNU6-705P-201ENST00000410601 104 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 RNA5SP111-201ENST00000411386 101 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AC022028.1-201ENST00000412054 408 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AC133104.1-201ENST00000429100 218 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 C8orf59P1-201ENST00000429930 303 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AC011458.1-201ENST00000604034 617 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AC104695.3-201ENST00000604052 296 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AC004908.3-201ENST00000610248 625 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 TPRKBP2-201ENST00000565969 475 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AC012213.3-201ENST00000577199 777 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 MIR4300-201ENST00000581016 96 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 RNU6-652P-201ENST00000365488 107 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AL049734.2-201ENST00000441066 616 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AC003071.1-201ENST00000451219 789 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 RBBP4P6-201ENST00000508098 202 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 AC063944.3-201ENST00000609969 533 ntBASIC-0.4□□□□□ -2.47
UBR4Q5T4S7 RNU4-56P-201ENST00000364700 142 ntBASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 RNU6-679P-201ENST00000391003 106 ntBASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 RNA5SP323-201ENST00000391094 133 ntBASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 SNORA75.1-201ENST00000391130 148 ntBASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 RNU6-1095P-201ENST00000516148 108 ntBASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 AC007490.1-201ENST00000624321 703 ntBASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 MIR1262-201ENST00000408276 93 ntBASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 SNORD83.1-201ENST00000411362 77 ntBASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 FABP5P14-201ENST00000437273 393 ntBASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 RNU5A-7P-201ENST00000515979 116 ntBASIC-0.41□□□□□ -2.47
UBR4Q5T4S7 RNU6-57P-201ENST00000411348 103 ntBASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 SNRPEP8-201ENST00000442866 260 ntBASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 AC024589.1-201ENST00000512207 263 ntBASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 MTCO2P15-201ENST00000532655 656 ntBASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 MIR548AO-201ENST00000579992 96 ntBASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 AC131235.4-201ENST00000609288 620 ntBASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 MIR499B-201ENST00000636498 73 ntBASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 MTCO1P21-201ENST00000416634 589 ntBASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 MTND2P21-201ENST00000436242 1042 ntBASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 Y_RNA.657-201ENST00000515983 102 ntBASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 AP002360.4-201ENST00000606980 481 ntBASIC-0.41□□□□□ -2.48
UBR4Q5T4S7 RNU6-621P-201ENST00000364752 109 ntBASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 AF038458.1-201ENST00000588406 262 ntBASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 MIR6755-201ENST00000619993 66 ntBASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 MIR889-201ENST00000401280 79 ntBASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 AL451046.2-201ENST00000403074 277 ntBASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 MEMO1P3-201ENST00000459811 302 ntBASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 AC074133.1-201ENST00000515696 183 ntBASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 AF235103.2-201ENST00000525753 346 ntBASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 AC009268.1-201ENST00000561352 1203 ntBASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.42□□□□□ -2.48
UBR4Q5T4S7 AC011233.1-201ENST00000422812 283 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms