Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC090897.2-201ENST00000581715 130 ntBASIC4.35□□□□□ -1.71
CTC1Q2NKJ3 TCL6_2.1-201ENST00000615162 119 ntBASIC4.35□□□□□ -1.71
CTC1Q2NKJ3 U2.21-201ENST00000637295 81 ntBASIC4.35□□□□□ -1.71
CTC1Q2NKJ3 MIR4662A-201ENST00000637499 67 ntBASIC4.35□□□□□ -1.71
CTC1Q2NKJ3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTC1Q2NKJ3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTC1Q2NKJ3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTC1Q2NKJ3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTC1Q2NKJ3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 RNU6-778P-201ENST00000363269 103 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 Y_RNA.198-201ENST00000364013 98 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 Y_RNA.265-201ENST00000364677 108 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 SNORA18.2-201ENST00000383865 132 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 SNORA5A-201ENST00000384111 134 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 U8.11-201ENST00000384699 133 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 U8.12-201ENST00000384701 133 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 AL117342.1-201ENST00000404861 406 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 RN7SKP156-201ENST00000410308 342 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 U8.18-201ENST00000459285 133 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 RNA5SP57-201ENST00000459463 123 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 RPS29P19-201ENST00000479709 171 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 RNU6-581P-201ENST00000516214 105 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 RNU6-830P-201ENST00000516353 107 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 SNORA70.24-201ENST00000517233 118 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 AC007751.1-201ENST00000529260 376 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 AC005972.2-201ENST00000604690 348 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 uc_338.4-201ENST00000616635 176 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.34□□□□□ -1.71
CTC1Q2NKJ3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.34□□□□□ -1.72
CTC1Q2NKJ3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTC1Q2NKJ3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTC1Q2NKJ3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 U3.8-201ENST00000363675 217 ntBASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 MIR30B-201ENST00000384850 88 ntBASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 SRIP1-201ENST00000489235 288 ntBASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 AIG1P1-201ENST00000503376 148 ntBASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 MIR3136-201ENST00000583498 78 ntBASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 AL365205.2-201ENST00000594586 68 ntBASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CTC1Q2NKJ3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 RNU6-487P-201ENST00000365430 104 ntBASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 EIF4EP4-201ENST00000424916 578 ntBASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 AL121890.1-201ENST00000435457 205 ntBASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 RNU6-162P-201ENST00000516228 103 ntBASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 CYCSP30-201ENST00000546447 172 ntBASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 AL360157.1-201ENST00000565962 87 ntBASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 MIR3690-201ENST00000580266 75 ntBASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CTC1Q2NKJ3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 AL356292.1-201ENST00000283110 373 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 Y_RNA.213-201ENST00000364178 111 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 Y_RNA.344-201ENST00000365381 112 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 RNU6-622P-201ENST00000384272 103 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 MIR183-201ENST00000384958 110 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 MIR873-201ENST00000401120 77 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 RNA5SP390-201ENST00000410191 113 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 MIR1911-201ENST00000410783 80 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 NDUFB1P1-201ENST00000435191 180 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 AC006011.1-201ENST00000442758 349 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 RNU6-113P-201ENST00000516653 101 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 RPL23AP91-201ENST00000569211 455 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 MIR5588-201ENST00000581890 63 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 PCGEM1.1-201ENST00000613431 131 ntBASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
CTC1Q2NKJ3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTC1Q2NKJ3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms