Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.31□□□□□ -2.04
PCNAP12004 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.31□□□□□ -2.04
PCNAP12004 MTCYBP6-201ENST00000441810 138 ntBASIC2.31□□□□□ -2.04
PCNAP12004 AC009238.1-201ENST00000442165 424 ntBASIC2.31□□□□□ -2.04
PCNAP12004 AC009237.6-201ENST00000446969 424 ntBASIC2.31□□□□□ -2.04
PCNAP12004 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.31□□□□□ -2.04
PCNAP12004 AL049873.1-201ENST00000480540 376 ntBASIC2.31□□□□□ -2.04
PCNAP12004 RNU6-1114P-201ENST00000516022 107 ntBASIC2.31□□□□□ -2.04
PCNAP12004 RNU6-991P-201ENST00000516168 107 ntBASIC2.31□□□□□ -2.04
PCNAP12004 RNU5F-4P-201ENST00000516581 114 ntBASIC2.31□□□□□ -2.04
PCNAP12004 RNU4-77P-201ENST00000516692 156 ntBASIC2.31□□□□□ -2.04
PCNAP12004 MIR514B-201ENST00000516774 80 ntBASIC2.31□□□□□ -2.04
PCNAP12004 RNU7-4P-201ENST00000516961 62 ntBASIC2.31□□□□□ -2.04
PCNAP12004 RN7SKP295-201ENST00000517264 153 ntBASIC2.31□□□□□ -2.04
PCNAP12004 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.31□□□□□ -2.04
PCNAP12004 ANP32BP3-201ENST00000559213 706 ntBASIC2.31□□□□□ -2.04
PCNAP12004 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.31□□□□□ -2.04
PCNAP12004 AL356055.1-201ENST00000602528 446 ntBASIC2.31□□□□□ -2.04
PCNAP12004 SNORD14A-201ENST00000606526 91 ntBASIC2.31□□□□□ -2.04
PCNAP12004 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.31□□□□□ -2.04
PCNAP12004 AC005296.1-201ENST00000616145 209 ntBASIC2.31□□□□□ -2.04
PCNAP12004 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCNAP12004 Y_RNA.148-201ENST00000363557 117 ntBASIC2.3□□□□□ -2.04
PCNAP12004 RNU6-1001P-201ENST00000411265 100 ntBASIC2.3□□□□□ -2.04
PCNAP12004 MCFD2P1-201ENST00000417812 300 ntBASIC2.3□□□□□ -2.04
PCNAP12004 AC114482.1-201ENST00000418010 247 ntBASIC2.3□□□□□ -2.04
PCNAP12004 RNU7-14P-201ENST00000459331 62 ntBASIC2.3□□□□□ -2.04
PCNAP12004 RPS27P21-201ENST00000486977 252 ntBASIC2.3□□□□□ -2.04
PCNAP12004 AC026436.1-201ENST00000510537 270 ntBASIC2.3□□□□□ -2.04
PCNAP12004 RNA5SP54-201ENST00000516951 92 ntBASIC2.3□□□□□ -2.04
PCNAP12004 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.3□□□□□ -2.04
PCNAP12004 AC021269.2-201ENST00000532318 330 ntBASIC2.3□□□□□ -2.04
PCNAP12004 AC093023.1-201ENST00000547375 507 ntBASIC2.3□□□□□ -2.04
PCNAP12004 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.3□□□□□ -2.04
PCNAP12004 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.3□□□□□ -2.04
PCNAP12004 AC006600.1-201ENST00000572529 153 ntBASIC2.3□□□□□ -2.04
PCNAP12004 SNORD58B-201ENST00000607313 66 ntBASIC2.3□□□□□ -2.04
PCNAP12004 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.3□□□□□ -2.04
PCNAP12004 MIR4272-201ENST00000635924 64 ntBASIC2.3□□□□□ -2.04
PCNAP12004 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCNAP12004 AC005336.3-201ENST00000623833 2679 ntBASIC2.3□□□□□ -2.04
PCNAP12004 AL136360.1-201ENST00000503377 1900 ntBASIC2.29□□□□□ -2.04
PCNAP12004 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PCNAP12004 RNU1-76P-201ENST00000362903 159 ntBASIC2.29□□□□□ -2.04
PCNAP12004 RNU6-879P-201ENST00000364328 108 ntBASIC2.29□□□□□ -2.04
PCNAP12004 SNORA22B-201ENST00000383876 138 ntBASIC2.29□□□□□ -2.04
PCNAP12004 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.29□□□□□ -2.04
PCNAP12004 AC096638.1-201ENST00000444678 216 ntBASIC2.29□□□□□ -2.04
PCNAP12004 MTND4P19-201ENST00000446659 478 ntBASIC2.29□□□□□ -2.04
PCNAP12004 AC132942.1-201ENST00000486753 483 ntBASIC2.29□□□□□ -2.04
PCNAP12004 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.29□□□□□ -2.04
PCNAP12004 Y_RNA.711-201ENST00000516993 102 ntBASIC2.29□□□□□ -2.04
PCNAP12004 AC144568.1-201ENST00000520139 137 ntBASIC2.29□□□□□ -2.04
PCNAP12004 MZT1P2-201ENST00000604387 248 ntBASIC2.29□□□□□ -2.04
PCNAP12004 SNRPGP20-201ENST00000604477 205 ntBASIC2.29□□□□□ -2.04
PCNAP12004 AC025754.2-201ENST00000606491 432 ntBASIC2.29□□□□□ -2.04
PCNAP12004 U4atac.1-201ENST00000618345 95 ntBASIC2.29□□□□□ -2.04
PCNAP12004 U2.1-201ENST00000618978 145 ntBASIC2.29□□□□□ -2.04
PCNAP12004 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.29□□□□□ -2.04
PCNAP12004 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.29□□□□□ -2.04
PCNAP12004 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.29□□□□□ -2.04
PCNAP12004 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PCNAP12004 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PCNAP12004 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PCNAP12004 RNU6-545P-201ENST00000362681 104 ntBASIC2.28□□□□□ -2.04
PCNAP12004 SNORA3A-201ENST00000364113 130 ntBASIC2.28□□□□□ -2.04
PCNAP12004 RNU1-91P-201ENST00000364746 163 ntBASIC2.28□□□□□ -2.04
PCNAP12004 RNU6-1227P-201ENST00000383981 107 ntBASIC2.28□□□□□ -2.04
PCNAP12004 RNU6-281P-201ENST00000384212 103 ntBASIC2.28□□□□□ -2.04
PCNAP12004 RNU6-318P-201ENST00000384283 103 ntBASIC2.28□□□□□ -2.04
PCNAP12004 RNU1-148P-201ENST00000384472 162 ntBASIC2.28□□□□□ -2.04
PCNAP12004 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.28□□□□□ -2.04
PCNAP12004 AC010095.1-201ENST00000443543 144 ntBASIC2.28□□□□□ -2.04
PCNAP12004 HMGN2P18-201ENST00000450680 270 ntBASIC2.28□□□□□ -2.04
PCNAP12004 AC091179.3-201ENST00000474761 144 ntBASIC2.28□□□□□ -2.04
PCNAP12004 AL163540.1-201ENST00000485382 386 ntBASIC2.28□□□□□ -2.04
PCNAP12004 AC079804.2-201ENST00000490376 200 ntBASIC2.28□□□□□ -2.04
PCNAP12004 RPS23P5-201ENST00000495419 428 ntBASIC2.28□□□□□ -2.04
PCNAP12004 AC234781.5-201ENST00000508429 271 ntBASIC2.28□□□□□ -2.04
PCNAP12004 RNU6-1198P-201ENST00000516904 67 ntBASIC2.28□□□□□ -2.04
PCNAP12004 RNU1-117P-201ENST00000517041 158 ntBASIC2.28□□□□□ -2.04
PCNAP12004 AC034114.1-201ENST00000520293 285 ntBASIC2.28□□□□□ -2.04
PCNAP12004 AC026470.2-201ENST00000561492 181 ntBASIC2.28□□□□□ -2.04
PCNAP12004 SNORD53-201ENST00000579969 78 ntBASIC2.28□□□□□ -2.04
PCNAP12004 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.28□□□□□ -2.04
PCNAP12004 TCL6_2.1-201ENST00000615162 119 ntBASIC2.28□□□□□ -2.04
PCNAP12004 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.28□□□□□ -2.04
PCNAP12004 MIR1291-201ENST00000627649 87 ntBASIC2.28□□□□□ -2.04
PCNAP12004 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
PCNAP12004 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PCNAP12004 MTND4P1-201ENST00000457501 1466 ntBASIC2.27□□□□□ -2.05
PCNAP12004 AC091812.1-201ENST00000432235 1948 ntBASIC2.27□□□□□ -2.05
PCNAP12004 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
PCNAP12004 Y_RNA.28-201ENST00000362554 111 ntBASIC2.27□□□□□ -2.05
PCNAP12004 AL033519.2-201ENST00000403958 392 ntBASIC2.27□□□□□ -2.05
PCNAP12004 MIR1302-11-201ENST00000408051 138 ntBASIC2.27□□□□□ -2.05
PCNAP12004 MIR1302-9-201ENST00000408365 138 ntBASIC2.27□□□□□ -2.05
PCNAP12004 MIR1302-10-201ENST00000408734 138 ntBASIC2.27□□□□□ -2.05
PCNAP12004 AC005534.2-201ENST00000431047 433 ntBASIC2.27□□□□□ -2.05
PCNAP12004 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms