Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 YPEL5P3-201ENST00000547227 352 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 AC106785.1-201ENST00000565935 262 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 AC002064.3-201ENST00000623448 346 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 MIR7641-1-201ENST00000627518 61 ntBASIC4.46□□□□□ -1.7
ACTN4O43707 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ACTN4O43707 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACTN4O43707 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ACTN4O43707 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ACTN4O43707 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACTN4O43707 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.45□□□□□ -1.7
ACTN4O43707 RNU6-1138P-201ENST00000365359 106 ntBASIC4.45□□□□□ -1.7
ACTN4O43707 Y_RNA.486-201ENST00000384398 107 ntBASIC4.45□□□□□ -1.7
ACTN4O43707 RNU6-592P-201ENST00000411333 103 ntBASIC4.45□□□□□ -1.7
ACTN4O43707 snoU13.28-201ENST00000459235 104 ntBASIC4.45□□□□□ -1.7
ACTN4O43707 RNU6-221P-201ENST00000459541 99 ntBASIC4.45□□□□□ -1.7
ACTN4O43707 AC026726.1-201ENST00000512859 601 ntBASIC4.45□□□□□ -1.7
ACTN4O43707 MIR3609-201ENST00000582661 80 ntBASIC4.45□□□□□ -1.7
ACTN4O43707 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
ACTN4O43707 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACTN4O43707 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACTN4O43707 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
ACTN4O43707 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ACTN4O43707 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
ACTN4O43707 Y_RNA.66-201ENST00000362862 102 ntBASIC4.44□□□□□ -1.7
ACTN4O43707 RNU6-1209P-201ENST00000363655 107 ntBASIC4.44□□□□□ -1.7
ACTN4O43707 MIR590-201ENST00000385008 97 ntBASIC4.44□□□□□ -1.7
ACTN4O43707 RNU6-57P-201ENST00000411348 103 ntBASIC4.44□□□□□ -1.7
ACTN4O43707 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.44□□□□□ -1.7
ACTN4O43707 AC008155.2-201ENST00000464337 397 ntBASIC4.44□□□□□ -1.7
ACTN4O43707 RN7SL860P-201ENST00000473738 223 ntBASIC4.44□□□□□ -1.7
ACTN4O43707 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.44□□□□□ -1.7
ACTN4O43707 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ACTN4O43707 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ACTN4O43707 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.44□□□□□ -1.7
ACTN4O43707 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ACTN4O43707 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.44□□□□□ -1.7
ACTN4O43707 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ACTN4O43707 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ACTN4O43707 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.43□□□□□ -1.7
ACTN4O43707 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ACTN4O43707 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ACTN4O43707 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ACTN4O43707 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.43□□□□□ -1.7
ACTN4O43707 Y_RNA.796-201ENST00000364268 102 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 RNA5SP130-201ENST00000364431 114 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 Y_RNA.799-201ENST00000364992 102 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 RNU6-1279P-201ENST00000383917 103 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 MIR562-201ENST00000384894 95 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 RNA5SP354-201ENST00000391247 136 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ACTN4O43707 RNU2-49P-201ENST00000410666 184 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 Y_RNA.625-201ENST00000411256 107 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 AC245291.1-201ENST00000419501 328 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 AC245102.2-201ENST00000448956 180 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 AC112771.1-201ENST00000463581 102 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 RNU6-504P-201ENST00000516568 104 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 AC107294.3-201ENST00000609211 526 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 AL591424.2-201ENST00000617023 128 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 MIR2052-201ENST00000636055 55 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 USP8P1-201ENST00000494673 3183 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.43□□□□□ -1.7
ACTN4O43707 AC006504.1-201ENST00000562493 3666 ntBASIC4.43□□□□□ -1.7
ACTN4O43707 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ACTN4O43707 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ACTN4O43707 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ACTN4O43707 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ACTN4O43707 Y_RNA.219-201ENST00000364232 113 ntBASIC4.42□□□□□ -1.7
ACTN4O43707 RNA5SP189-201ENST00000364920 115 ntBASIC4.42□□□□□ -1.7
ACTN4O43707 RNU6-117P-201ENST00000365415 107 ntBASIC4.42□□□□□ -1.7
ACTN4O43707 Y_RNA.366-201ENST00000365540 102 ntBASIC4.42□□□□□ -1.7
ACTN4O43707 SNORD78.1-201ENST00000390866 65 ntBASIC4.42□□□□□ -1.7
ACTN4O43707 RNA5SP310-201ENST00000459084 116 ntBASIC4.42□□□□□ -1.7
ACTN4O43707 RNU7-14P-201ENST00000459331 62 ntBASIC4.42□□□□□ -1.7
ACTN4O43707 RN7SKP289-201ENST00000517244 295 ntBASIC4.42□□□□□ -1.7
ACTN4O43707 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.42□□□□□ -1.7
ACTN4O43707 SNORD115-40-201ENST00000606510 82 ntBASIC4.42□□□□□ -1.7
ACTN4O43707 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.42□□□□□ -1.7
ACTN4O43707 Y_RNA.818-201ENST00000618813 71 ntBASIC4.42□□□□□ -1.7
ACTN4O43707 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ACTN4O43707 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ACTN4O43707 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ACTN4O43707 LINC02471-203ENST00000641941 4752 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 AC010889.1-201ENST00000566193 2666 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACTN4O43707 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ACTN4O43707 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACTN4O43707 RNA5SP322-201ENST00000363617 119 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 SNORD32B-201ENST00000364460 84 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 SNORA1-201ENST00000384107 130 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 MIR181B1-201ENST00000385240 110 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 AL356095.1-201ENST00000417217 199 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 AC005921.1-201ENST00000510589 286 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.41□□□□□ -1.7
ACTN4O43707 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 MIR4284-201ENST00000578924 81 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 MIR3939-201ENST00000582614 106 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 MIR486-1-201ENST00000612171 68 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 AC134878.1-201ENST00000619901 243 ntBASIC4.41□□□□□ -1.7
ACTN4O43707 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms