Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 RAB28P5-201ENST00000427490 651 ntBASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 RNU7-63P-201ENST00000459054 62 ntBASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 AC007215.1-201ENST00000464893 276 ntBASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 SCARNA16.2-201ENST00000516520 172 ntBASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 TPRKBP2-201ENST00000565969 475 ntBASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 MTATP6P3-201ENST00000581686 676 ntBASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 AL513534.2-201ENST00000603836 250 ntBASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 AC137590.2-201ENST00000619709 240 ntBASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 snoZ196.1-201ENST00000625269 89 ntBASIC0.87□□□□□ -2.27
TRAV25A0A0B4J276 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 SNORA72.3-201ENST00000365074 132 ntBASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 RNA5SP219-201ENST00000390940 113 ntBASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 MTND1P27-201ENST00000451117 902 ntBASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 AC005840.1-201ENST00000498412 377 ntBASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 SNORA14.1-201ENST00000516113 141 ntBASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 AC087854.1-201ENST00000519706 414 ntBASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 MIR5583-1-201ENST00000580941 59 ntBASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 FGF7P1-201ENST00000582820 288 ntBASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 MIR4295-201ENST00000585286 85 ntBASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 AC005609.4-201ENST00000625071 447 ntBASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV25A0A0B4J276 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 RNU4-79P-201ENST00000362764 141 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 RNU1-36P-201ENST00000365130 165 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 RNU6-1240P-201ENST00000365155 104 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 SNORD12-201ENST00000391002 90 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 AL034345.1-201ENST00000407768 123 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 AC244505.5-201ENST00000443639 207 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 RPS27P1-201ENST00000450552 247 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 RNU7-180P-201ENST00000459240 63 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 AC087343.1-201ENST00000477341 475 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 SNORA31.2-201ENST00000516019 134 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 AC004223.2-201ENST00000590309 544 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 AC109347.2-201ENST00000610220 349 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 AL513423.1-201ENST00000621695 132 ntBASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV25A0A0B4J276 Y_RNA.123-201ENST00000363338 102 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 SNORD114-24-201ENST00000365029 72 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 RNU6-996P-201ENST00000365438 107 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 RNU6-910P-201ENST00000390844 107 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 SNRPEP10-201ENST00000420249 274 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 MTCO2P11-201ENST00000431069 680 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 RPS29P28-201ENST00000446439 141 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 AC090821.2-201ENST00000523552 176 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 AL360219.1-201ENST00000610230 366 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 GHRLOS.1-201ENST00000610995 70 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 MIR8054-201ENST00000620877 86 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 AC008873.1-201ENST00000625051 138 ntBASIC0.84□□□□□ -2.27
TRAV25A0A0B4J276 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AL606923.1-201ENST00000406616 190 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 RNU2-64P-201ENST00000411315 191 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AC004866.1-201ENST00000411748 78 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 MTND2P18-201ENST00000419962 1030 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AC063976.4-201ENST00000421971 163 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 MTCYBP8-201ENST00000422855 651 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 TIMM9P3-201ENST00000428659 274 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AC245047.3-201ENST00000429428 127 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AL606517.2-201ENST00000442855 241 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 RPS29P29-201ENST00000456396 171 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AC092991.1-201ENST00000477176 376 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AC093852.1-201ENST00000503587 266 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 SNORA31.10-201ENST00000516482 106 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-344P-201ENST00000516635 111 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AC025647.1-201ENST00000517879 253 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AL162424.1-201ENST00000602325 221 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 HULC.1-201ENST00000612720 240 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 AC091895.1-201ENST00000624494 256 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 SNORD3E-202ENST00000627253 216 ntBASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV25A0A0B4J276 MRPL42P3-201ENST00000401492 326 ntBASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 MIR1285-1-201ENST00000408593 84 ntBASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-221P-201ENST00000459541 99 ntBASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 TRBVA-201ENST00000498804 316 ntBASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 AC103851.1-201ENST00000506833 274 ntBASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-922P-201ENST00000516753 99 ntBASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 MRPS36P4-201ENST00000534436 298 ntBASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 AC004584.2-201ENST00000570407 410 ntBASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 AC068790.6-201ENST00000602558 258 ntBASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 AC022217.4-201ENST00000604389 163 ntBASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 SCARNA4-201ENST00000629045 128 ntBASIC0.82□□□□□ -2.28
TRAV25A0A0B4J276 RNU4-76P-201ENST00000364509 141 ntBASIC0.81□□□□□ -2.28
TRAV25A0A0B4J276 RNU6-1317P-201ENST00000364582 104 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms